Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874330

Identifier: 160874330

GI number: 160874330

Start: 1437773

End: 1438495

Strand: Reverse

Name: 160874330

Synonym: Sbal195_1211

Alternate gene names: NA

Gene position: 1438495-1437773 (Counterclockwise)

Preceding gene: 160874331

Following gene: 160874329

Centisome position: 26.9

GC content: 43.57

Gene sequence:

>723_bases
ATGAACCAACACGTATTACTTAACAGCGTAGATCATAAAGATATTAAAATTATCACTGAGCGTAGTGCTAAGTACGGCGA
TAATGTCTGGTTCAGTGTCACTTTTCCGGCGGAGTTTCGCAGCGTACAGGCGCATTATCCGATTTTTTTCCAAAAGGATC
AGTCCACAGGCCAGTTCTTTGCAGTGGCGCTTTATGGTTTTCAAAATAATGAGAATCTGTTTTTAAATAATGGCACTTGG
CAGGCTTCTTATATCCCTCTCACCCTACGTCGTCAGCCGTTTCTTATTGGTCAGCAAAGCGTGCGTGAAGACGGTGTCGA
GCGCAAACAAAGGGTCATACATATCGATATGGCGAGCCCAAAAGTCAGCACAACCGAAGGCGAAGCTTTGTTCCATCCCT
ATGGTGGGAATACGCAATATCTGGATGACATTGGGGATATGTTAGAAGGTATCCACCACGGGCTTATCGACAGTAAGCAC
TTTATCGATTTGCTTATCGAACATAAGTTGCTGGAATCCTTTACCTTAGATATCAAGCTCGACAATGGCCACCAACATCA
AATGATGGGTTTCTATACTATTAATGAAGAAACGCTAGCGGCCCTTTCGGCAGAAGTGCTCGCTCAATTACATGCTAAAA
GTTATCTAGAGGCGATTTACATGACCTTGGCCTCACAGGCAAGAATACGTGACTTGCTTAACCTTAAAAATGCGCAAGGT
TAA

Upstream 100 bases:

>100_bases
CTATTAAACAAGGTCAGGCAATTTGGTTTCCCTAAGATTTAGCACAAATAACAAGAATAACTCGCGGCAGTGAGAACCAA
CAAAGGACAAAGGTAACCCT

Downstream 100 bases:

>100_bases
CTAGGTCGCAGCTATGAGTCTTGATGTGATTAAACCTAAAACTAATGTCGTCAAACACCTTGAAAACTGCTCAACCGAGG
AGATGATCGCGCTGATTAAA

Product: SapC family protein

Products: NA

Alternate protein names: SapC-Related Protein; SapC Related Protein; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; SapC Superfamily; Sapc Family Protein

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW
QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH
FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG

Sequences:

>Translated_240_residues
MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW
QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH
FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG
>Mature_240_residues
MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW
QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH
FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27397; Mature: 27397

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFF
CCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHCCEECCCCEEEEECCCCCCEE
AVALYGFQNNENLFLNNGTWQASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASP
EEEEEEEECCCEEEEECCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHEEEEEEECCC
KVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHKLLESFTLDIKL
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE
DNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG
CCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFF
CCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHCCEECCCCEEEEECCCCCCEE
AVALYGFQNNENLFLNNGTWQASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASP
EEEEEEEECCCEEEEECCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHEEEEEEECCC
KVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHKLLESFTLDIKL
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE
DNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG
CCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA