| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874186
Identifier: 160874186
GI number: 160874186
Start: 1265796
End: 1266359
Strand: Reverse
Name: 160874186
Synonym: Sbal195_1066
Alternate gene names: NA
Gene position: 1266359-1265796 (Counterclockwise)
Preceding gene: 160874188
Following gene: 160874185
Centisome position: 23.68
GC content: 46.1
Gene sequence:
>564_bases ATGATGATCCAACATTCTGATAAATTGATACAACGACATCAAACGGGTTTCACCTTAATAGAGCTTGTGGTGGTCATCAT AGTGCTCGGTATTTTAGCGGTAGTGGCCCTGCCAAAATTTATCAATGTGCAGCAAGATGCGCAAATCGCTACAGTCAAAG CCGCAGGCGGTGGCTTTAAGTCAGCGATCAATCTGGCTCGCTCCGTTTGGGCGGTAAAAGTGGGCTCTGGTCCAAAAGAA GACTTACCCGTATTTGGCACGGCGCAATCTGAACAAGTGGATTTCAACGCCTTCGGCTGGCCTGCACAGCACTATATCTT TGGTAATGAAGCCTCACCGTCGCTTGATAATGTCGAAGACTGTATCTCGGTATGGGAAGTATTATTCCAAAATACCCAAC CGAGTGTCTCGCGCTTAAATGTTGATGTGACAGAAACCGACTACAAAGCCAGTTATACCAATCCTGGCCAGTGCACTTAT TTCTATCGAACAAACGACAAACTCTCGATCAGTTATGACTCCCAAACCGGAGTCGTCATTACCGACACAGATCCCAATAG TTAA
Upstream 100 bases:
>100_bases GATACGGCTATGTTTGCAGTGTTTCGCTTTAAGACTTTCAATTTAAAACATTCGAATTTAAATGCTATAGTGCGCCCATT CTCGCACTGTCTAATACGCC
Downstream 100 bases:
>100_bases TGCCTGACGATTCCTTCTTACGTCAATTAAGTTAGAATCGAACTTTAATCTGTTATTTTTTAGAGTGAACGCCATGACCG ACACGAGCAACACCACCATT
Product: pilin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MMIQHSDKLIQRHQTGFTLIELVVVIIVLGILAVVALPKFINVQQDAQIATVKAAGGGFKSAINLARSVWAVKVGSGPKE DLPVFGTAQSEQVDFNAFGWPAQHYIFGNEASPSLDNVEDCISVWEVLFQNTQPSVSRLNVDVTETDYKASYTNPGQCTY FYRTNDKLSISYDSQTGVVITDTDPNS
Sequences:
>Translated_187_residues MMIQHSDKLIQRHQTGFTLIELVVVIIVLGILAVVALPKFINVQQDAQIATVKAAGGGFKSAINLARSVWAVKVGSGPKE DLPVFGTAQSEQVDFNAFGWPAQHYIFGNEASPSLDNVEDCISVWEVLFQNTQPSVSRLNVDVTETDYKASYTNPGQCTY FYRTNDKLSISYDSQTGVVITDTDPNS >Mature_187_residues MMIQHSDKLIQRHQTGFTLIELVVVIIVLGILAVVALPKFINVQQDAQIATVKAAGGGFKSAINLARSVWAVKVGSGPKE DLPVFGTAQSEQVDFNAFGWPAQHYIFGNEASPSLDNVEDCISVWEVLFQNTQPSVSRLNVDVTETDYKASYTNPGQCTY FYRTNDKLSISYDSQTGVVITDTDPNS
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20490; Mature: 20490
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIQHSDKLIQRHQTGFTLIELVVVIIVLGILAVVALPKFINVQQDAQIATVKAAGGGFK CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHH SAINLARSVWAVKVGSGPKEDLPVFGTAQSEQVDFNAFGWPAQHYIFGNEASPSLDNVED HHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH CISVWEVLFQNTQPSVSRLNVDVTETDYKASYTNPGQCTYFYRTNDKLSISYDSQTGVVI HHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEE TDTDPNS ECCCCCC >Mature Secondary Structure MMIQHSDKLIQRHQTGFTLIELVVVIIVLGILAVVALPKFINVQQDAQIATVKAAGGGFK CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHH SAINLARSVWAVKVGSGPKEDLPVFGTAQSEQVDFNAFGWPAQHYIFGNEASPSLDNVED HHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH CISVWEVLFQNTQPSVSRLNVDVTETDYKASYTNPGQCTYFYRTNDKLSISYDSQTGVVI HHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEE TDTDPNS ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA