| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874185
Identifier: 160874185
GI number: 160874185
Start: 1265402
End: 1265722
Strand: Reverse
Name: 160874185
Synonym: Sbal195_1065
Alternate gene names: NA
Gene position: 1265722-1265402 (Counterclockwise)
Preceding gene: 160874186
Following gene: 160874182
Centisome position: 23.67
GC content: 47.04
Gene sequence:
>321_bases ATGACCGACACGAGCAACACCACCATTTACGAACTTGCCGATCAGTTTATTGCCTTAGCCAATCAGCTAAGCCAACAAGA AGCAGATGTAGGTAAAGTTGGCACTGCACTCCGTTTTGCCGCGGCACGTTTTAACGCCTTCGAAGCCGCGATTAAATCAG CGGATCTCGGCGCCGAGAAAGAAAGTGCATTAGAATGGTTTAGCAGTGAATTCAAAGAAATGCTGAGTGACAACTTAGAC GATCACATCGCGAATCCGCCAATTCTCCAAGAAGCGGTGGCAGAACAAGCCGACAATTCAGTGCAAATGTTTAAAGGCTA A
Upstream 100 bases:
>100_bases ATTACCGACACAGATCCCAATAGTTAATGCCTGACGATTCCTTCTTACGTCAATTAAGTTAGAATCGAACTTTAATCTGT TATTTTTTAGAGTGAACGCC
Downstream 100 bases:
>100_bases GCACGCCCTTCATGCATAGCGATAACATAAAAAACGCCATCGATTGATGGCGTTTTTGTTTGTTGAAACAAATTACCTGC AATAAATAATTAAAGCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTDTSNTTIYELADQFIALANQLSQQEADVGKVGTALRFAAARFNAFEAAIKSADLGAEKESALEWFSSEFKEMLSDNLD DHIANPPILQEAVAEQADNSVQMFKG
Sequences:
>Translated_106_residues MTDTSNTTIYELADQFIALANQLSQQEADVGKVGTALRFAAARFNAFEAAIKSADLGAEKESALEWFSSEFKEMLSDNLD DHIANPPILQEAVAEQADNSVQMFKG >Mature_105_residues TDTSNTTIYELADQFIALANQLSQQEADVGKVGTALRFAAARFNAFEAAIKSADLGAEKESALEWFSSEFKEMLSDNLDD HIANPPILQEAVAEQADNSVQMFKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11560; Mature: 11429
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTSNTTIYELADQFIALANQLSQQEADVGKVGTALRFAAARFNAFEAAIKSADLGAEK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ESALEWFSSEFKEMLSDNLDDHIANPPILQEAVAEQADNSVQMFKG HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure TDTSNTTIYELADQFIALANQLSQQEADVGKVGTALRFAAARFNAFEAAIKSADLGAEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ESALEWFSSEFKEMLSDNLDDHIANPPILQEAVAEQADNSVQMFKG HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA