| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874182
Identifier: 160874182
GI number: 160874182
Start: 1262235
End: 1262786
Strand: Reverse
Name: 160874182
Synonym: Sbal195_1062
Alternate gene names: NA
Gene position: 1262786-1262235 (Counterclockwise)
Preceding gene: 160874185
Following gene: 160874180
Centisome position: 23.62
GC content: 45.29
Gene sequence:
>552_bases ATGAGCACTATTACTCTGATCAGTATTGTCATTCTTTGTCTATTAATCGGCGCTATCTTGCTGCTGATTTGGCAAAGACA AAAAGGAAAAACCATACCGCTGGCGGTGATATTTGTACTGGGATTTTTCGCCTTAGGACTTGGCGCTATTATTGGATTTG TGCATAAAGGCGAGGATTATCAAGCCTATCAAAAACTGCAATGGCACACCTTAGCGCCCGAGCAAATTGCGCCTCTGGTT GCCCAAGGCTATACAGTGTTTGTCGATATCACTTCAGATTGGTGCACCATTTGCCAAACCAATAAAGCCGAAGTCACCCA CAGGGAACAAATTGTGAATGCCTTAATGGCAGACAACATTATCCTGATGCAAGGCAACTGGAGTGAGGCCAACAAAACGA TTGAAAGCTATATGCGCCATGAAGGTGTACCTGGTACGCCCTACAATAAAATCTACGGTCCAAGCGCACCCAATGGCATT CTTTTGCCGTCAAAACTCAGTATGAGTGATGTGCTGAATGGCCTTGCTGCCGCACAAACGAATCGCAGCTAA
Upstream 100 bases:
>100_bases TGATTTAAGCCGTTAACCGCTAAGATAAGCACGAATCTAAGTCTGTATTCCTAAGCCTCTATGTTTAATAAAGGCACGCC ATTCTCCAGCAGGAAATTTT
Downstream 100 bases:
>100_bases CGGAAAAACAACCAATAAAAAAGGCTGCACTGCAGCCTTTTTGCTCACTTCACTTCAAATCTATAAAAGCCAAATTTCTT GAAAGGTGGGTTAGAAATCG
Product: thiol:disulfide interchange protein
Products: NA
Alternate protein names: Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein; ThiolDisulfide Interchange Protein DsbD; Metal Resistance Protein; ThiolDisulfide Interchange; Copper-Sensitivity B Suppressor; ThiolDisulfide Interchange Protein-Like Protein; Cytochrome C Biogenesis Transmembrane Protein; Protein-Disulfide Reductase; Copper-Sensitivity Suppressor B Protein; Copper Sensitivity Suppressor Membrane Protein B; C-Type Cytochrome Biogenesis Protein
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSTITLISIVILCLLIGAILLLIWQRQKGKTIPLAVIFVLGFFALGLGAIIGFVHKGEDYQAYQKLQWHTLAPEQIAPLV AQGYTVFVDITSDWCTICQTNKAEVTHREQIVNALMADNIILMQGNWSEANKTIESYMRHEGVPGTPYNKIYGPSAPNGI LLPSKLSMSDVLNGLAAAQTNRS
Sequences:
>Translated_183_residues MSTITLISIVILCLLIGAILLLIWQRQKGKTIPLAVIFVLGFFALGLGAIIGFVHKGEDYQAYQKLQWHTLAPEQIAPLV AQGYTVFVDITSDWCTICQTNKAEVTHREQIVNALMADNIILMQGNWSEANKTIESYMRHEGVPGTPYNKIYGPSAPNGI LLPSKLSMSDVLNGLAAAQTNRS >Mature_182_residues STITLISIVILCLLIGAILLLIWQRQKGKTIPLAVIFVLGFFALGLGAIIGFVHKGEDYQAYQKLQWHTLAPEQIAPLVA QGYTVFVDITSDWCTICQTNKAEVTHREQIVNALMADNIILMQGNWSEANKTIESYMRHEGVPGTPYNKIYGPSAPNGIL LPSKLSMSDVLNGLAAAQTNRS
Specific function: Unknown
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20085; Mature: 19954
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTITLISIVILCLLIGAILLLIWQRQKGKTIPLAVIFVLGFFALGLGAIIGFVHKGEDY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH QAYQKLQWHTLAPEQIAPLVAQGYTVFVDITSDWCTICQTNKAEVTHREQIVNALMADNI HHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCE ILMQGNWSEANKTIESYMRHEGVPGTPYNKIYGPSAPNGILLPSKLSMSDVLNGLAAAQT EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC NRS CCC >Mature Secondary Structure STITLISIVILCLLIGAILLLIWQRQKGKTIPLAVIFVLGFFALGLGAIIGFVHKGEDY CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH QAYQKLQWHTLAPEQIAPLVAQGYTVFVDITSDWCTICQTNKAEVTHREQIVNALMADNI HHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCE ILMQGNWSEANKTIESYMRHEGVPGTPYNKIYGPSAPNGILLPSKLSMSDVLNGLAAAQT EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC NRS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA