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The map label for this gene is yerO

Identifier: 16077738

GI number: 16077738

Start: 731954

End: 732823

Strand: Reverse

Name: yerO

Synonym: BSU06700

Alternate gene names: 16077738

Gene position: 732823-731954 (Counterclockwise)

Preceding gene: 16077742

Following gene: 16077734

Centisome position: 17.38

GC content: 41.95

Gene sequence:

>870_bases
ATGAATGAAAAAAAAGAGAGAATCATAAAAACCAGCATTCGTTTATTTGCGAAAAAAGGATTCGCAGCTACGACGATCCA
AGAAATCGCCAGTGAATGCGGCATTTCGAAGGGCGCTTTTTATTTGCACTTCAAATCGAAAGAAGCGCTGCTGTTATCTG
CCTGTGAATATTATATCGGTATGTCTATGAACAAAATGAAAAATATAGAAGAAGATCTCGCCGGAAAGCCGCCTAAGGAA
GTGTTAAAAAAGCAAATTGGCGCTCAATTTGAGGATTTTCGCGATCATAAAGATTTTATCGTTCTTTTGCTTACCGAAAA
TATCATTCCGGAAAATCAAGAAATCAAGCAATACTTTTACAAAGTAACCATGGAGACGGATAAGCTGTACCGGAACGCCT
TGCTGGTATCCTATGGCGAAGGAATCGAGCGGTATGTCGCAGATCTGTCCATCATGGCAAGAGGCATTGTGCATTCCTAT
ATGAACGTGATGGTATTTAACGGTGAGCTTAATATCGATGCAGAAGAAATCTCAGCCTTTATTATTGAGAGACTGGATGA
TCTTGTACAGGGGCTGAGCCGTTCTGCACTCAATCCGATTGTATCAAAAGACATTTTTAACCCGATGCCTGCGGGAAAAG
ACCAGCTGCTTGAGGACATTCAGAAAGTGAAAGAAAACAGCACGCTGCCCGAGGATATCACCGTGTCACTTGATGTTATC
GAGGAAGAATTGACTCAGGATAAACCGCGCAAGCCGATTATTAAAGGCATGCTGTCCAATTTGGCCGGAACCAACGACAA
AGAAGTTGAAAGGCTTCGGGCCCTCATCTTGTCTTTATCTCAATTTGACCATAAAAAAAGCAGCCTCTAA

Upstream 100 bases:

>100_bases
CTGGTCATTCTATATAATACTAAACGTTATAACGCAACAACGTCAACTCATATACCAGAAAATTTTACTAAATTTTTCAA
GGATTAAGGGGAAGCACGTC

Downstream 100 bases:

>100_bases
GGGCTGCTTTTTTATTAGCGTTTTTTAATTTCTTCAAGCAGAATTTTGTTGACCATCGGCGGGTTGGCTTGTCCTTTGGA
CGCTTTCATAATCTGTCCGA

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYIGMSMNKMKNIEEDLAGKPPKE
VLKKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSY
MNVMVFNGELNIDAEEISAFIIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSLDVI
EEELTQDKPRKPIIKGMLSNLAGTNDKEVERLRALILSLSQFDHKKSSL

Sequences:

>Translated_289_residues
MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYIGMSMNKMKNIEEDLAGKPPKE
VLKKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSY
MNVMVFNGELNIDAEEISAFIIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSLDVI
EEELTQDKPRKPIIKGMLSNLAGTNDKEVERLRALILSLSQFDHKKSSL
>Mature_289_residues
MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYIGMSMNKMKNIEEDLAGKPPKE
VLKKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSY
MNVMVFNGELNIDAEEISAFIIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSLDVI
EEELTQDKPRKPIIKGMLSNLAGTNDKEVERLRALILSLSQFDHKKSSL

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YERO_BACSU (O31500)

Other databases:

- EMBL:   AL009126
- PIR:   D69795
- RefSeq:   NP_388552.1
- ProteinModelPortal:   O31500
- SMR:   O31500
- EnsemblBacteria:   EBBACT00000001663
- GeneID:   939889
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU06700
- NMPDR:   fig|224308.1.peg.671
- GenoList:   BSU06700
- GeneTree:   EBGT00050000000417
- HOGENOM:   HBG341453
- OMA:   LHFKSKE
- ProtClustDB:   CLSK2460893
- BioCyc:   BSUB:BSU06700-MONOMER
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- PRINTS:   PR00455

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 32846; Mature: 32846

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYIG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
MSMNKMKNIEEDLAGKPPKEVLKKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFY
CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH
KVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSYMNVMVFNGELNIDAEEISAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH
IIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSLDVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEHHHHH
EEELTQDKPRKPIIKGMLSNLAGTNDKEVERLRALILSLSQFDHKKSSL
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYIG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
MSMNKMKNIEEDLAGKPPKEVLKKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFY
CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH
KVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSYMNVMVFNGELNIDAEEISAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH
IIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSLDVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEHHHHH
EEELTQDKPRKPIIKGMLSNLAGTNDKEVERLRALILSLSQFDHKKSSL
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377