Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is purA [H]
Identifier: 159901106
GI number: 159901106
Start: 5875209
End: 5876495
Strand: Direct
Name: purA [H]
Synonym: Haur_4594
Alternate gene names: 159901106
Gene position: 5875209-5876495 (Clockwise)
Preceding gene: 159901105
Following gene: 159901115
Centisome position: 92.57
GC content: 52.06
Gene sequence:
>1287_bases ATGCCAGTCGTTGCAGTTCTTGGCGCTCAATGGGGCGACGAGGGCAAAGGTCGTGTTGTCGATTTATTGGCAACCAAAGC TAAAATGGTTATTCGCGCTGCTGGTGGCTCTAATGCCGGCCATACGGTGATTAACCATCTTGGCACGTTTAAATTGCACC TCACGCCTGCCGGAATTTTCGATGCGAATGTCGTCAATATTATCGGCGCAGGCACCGTGATCGATCCTGCGGTGTTGATG AAGGAGTTGCAGGCCTTACGTGAGGCCAATGTTTCGCTTGATCAATTATATATCAGCGATCGGGCACATGTGGTTATGCC CTATCACGTTTCGCTCGATGCGCTCGAAGAAAAAGATCGCGGCGCGAACGAAATTGGCACAACTAAGCGTGGTATTGGCC CAGCCTACGTCGATAAAGCGTCGCGCATGGGCATTCGTATGGGCGATTTGCTGCACGAAGAAACCTTGCTTAGTCGCCTA ACCAGCGTGCTCGAATACAAGGGCCGCGTGTTGAATAAGATGTATGGCGCTCAGCCAAGCGCTTCATTGCATGATATGTA TCTGCAATATTTGGAGTTTGGTCGCCAACTCGAAGCCCACATCGTGCCCATCCACACCATGGTTCAAGATGCCTTGCGCC GCGATATTCCAATTTTGATCGAGGGCAATCAAGGAGCATTATTGGATGTGGATTATGGCACATTCCCGTATGTGACTTCA ACTGCAACTGGCTCTGCGGGCGCGTGCCAAGGCGCGGGAATTCCGCCGATGCGCTTAAATGGTGTAGTCGGAATTTACAA AGCCTACACAACCCGCGTTGGCGGTGGGCCATTCCCAACCGAATTAACCGATGAACTTGGTGAGTATATTCGCCAAGCCG GCCATGAGTTTGGCACAACCACTGGTCGCCCACGACGGGTTGGCTGGTTCGATGCGGTGGCAGCTCGCTATGCTGCCGAA ATTAATGGCATTAGCTCGATCGCCCTTACCAAACTCGATGTGCTCGACGATGTTGAGACGCTCAAAATTTGTACGGGCTA TCGCTGGAACGACACCGAGCTTGATTCATTCCCATCGTCAATTTCGGTGCTCAGCCAAGTTGAGCCAATTTACGAAGAAT ATCCTGGTTGGAAAACCAACACCAGCCATGCCCGCACCTTGGATGAGTTGCCCGAAGCGGCGCAACGCTATGTTCGCCGT CTCAGTCAATTGGTTGGCGTGCGCTTGGGCATGATTTCGGTCGGCCCTTCGCGTGAGCAAATGGTGAGTTTGCAAGAAAT CTTCTAA
Upstream 100 bases:
>100_bases CCAAATATGGCTTTTTGACGGTTTGGGCGTTATTCCGGCTGCGTTTGCTCGGTCGCCCATAACCACGGTATTTGCTCCTC TTACAGAAAAGGTGATACAT
Downstream 100 bases:
>100_bases ATTTTCATCCTTGCATATGGAATAAAAGCAAAGCCTCGGCTTGCTGATCTGGTTTGGCGTTTGTCTAACTAAATCACCAA GCCGAGGCTTTCGCGCCAAT
Product: adenylosuccinate synthase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPVVAVLGAQWGDEGKGRVVDLLATKAKMVIRAAGGSNAGHTVINHLGTFKLHLTPAGIFDANVVNIIGAGTVIDPAVLM KELQALREANVSLDQLYISDRAHVVMPYHVSLDALEEKDRGANEIGTTKRGIGPAYVDKASRMGIRMGDLLHEETLLSRL TSVLEYKGRVLNKMYGAQPSASLHDMYLQYLEFGRQLEAHIVPIHTMVQDALRRDIPILIEGNQGALLDVDYGTFPYVTS TATGSAGACQGAGIPPMRLNGVVGIYKAYTTRVGGGPFPTELTDELGEYIRQAGHEFGTTTGRPRRVGWFDAVAARYAAE INGISSIALTKLDVLDDVETLKICTGYRWNDTELDSFPSSISVLSQVEPIYEEYPGWKTNTSHARTLDELPEAAQRYVRR LSQLVGVRLGMISVGPSREQMVSLQEIF
Sequences:
>Translated_428_residues MPVVAVLGAQWGDEGKGRVVDLLATKAKMVIRAAGGSNAGHTVINHLGTFKLHLTPAGIFDANVVNIIGAGTVIDPAVLM KELQALREANVSLDQLYISDRAHVVMPYHVSLDALEEKDRGANEIGTTKRGIGPAYVDKASRMGIRMGDLLHEETLLSRL TSVLEYKGRVLNKMYGAQPSASLHDMYLQYLEFGRQLEAHIVPIHTMVQDALRRDIPILIEGNQGALLDVDYGTFPYVTS TATGSAGACQGAGIPPMRLNGVVGIYKAYTTRVGGGPFPTELTDELGEYIRQAGHEFGTTTGRPRRVGWFDAVAARYAAE INGISSIALTKLDVLDDVETLKICTGYRWNDTELDSFPSSISVLSQVEPIYEEYPGWKTNTSHARTLDELPEAAQRYVRR LSQLVGVRLGMISVGPSREQMVSLQEIF >Mature_427_residues PVVAVLGAQWGDEGKGRVVDLLATKAKMVIRAAGGSNAGHTVINHLGTFKLHLTPAGIFDANVVNIIGAGTVIDPAVLMK ELQALREANVSLDQLYISDRAHVVMPYHVSLDALEEKDRGANEIGTTKRGIGPAYVDKASRMGIRMGDLLHEETLLSRLT SVLEYKGRVLNKMYGAQPSASLHDMYLQYLEFGRQLEAHIVPIHTMVQDALRRDIPILIEGNQGALLDVDYGTFPYVTST ATGSAGACQGAGIPPMRLNGVVGIYKAYTTRVGGGPFPTELTDELGEYIRQAGHEFGTTTGRPRRVGWFDAVAARYAAEI NGISSIALTKLDVLDDVETLKICTGYRWNDTELDSFPSSISVLSQVEPIYEEYPGWKTNTSHARTLDELPEAAQRYVRRL SQLVGVRLGMISVGPSREQMVSLQEIF
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=440, Percent_Identity=42.2727272727273, Blast_Score=331, Evalue=8e-91, Organism=Homo sapiens, GI34577063, Length=438, Percent_Identity=41.7808219178082, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI40316944, Length=408, Percent_Identity=40.1960784313725, Blast_Score=286, Evalue=3e-77, Organism=Escherichia coli, GI1790620, Length=427, Percent_Identity=44.9648711943794, Blast_Score=376, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25146555, Length=434, Percent_Identity=39.1705069124424, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI25146553, Length=434, Percent_Identity=39.1705069124424, Blast_Score=303, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6324109, Length=432, Percent_Identity=38.8888888888889, Blast_Score=320, Evalue=3e-88, Organism=Drosophila melanogaster, GI21356033, Length=430, Percent_Identity=40.4651162790698, Blast_Score=335, Evalue=3e-92,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 46668; Mature: 46537
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVAVLGAQWGDEGKGRVVDLLATKAKMVIRAAGGSNAGHTVINHLGTFKLHLTPAGIF CCEEEEECCCCCCCCCCCEEHHHHHHHHEEEEECCCCCCCHHHHHHCCEEEEEEECCCCC DANVVNIIGAGTVIDPAVLMKELQALREANVSLDQLYISDRAHVVMPYHVSLDALEEKDR CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEEEEECCHHHHHHHCC GANEIGTTKRGIGPAYVDKASRMGIRMGDLLHEETLLSRLTSVLEYKGRVLNKMYGAQPS CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASLHDMYLQYLEFGRQLEAHIVPIHTMVQDALRRDIPILIEGNQGALLDVDYGTFPYVTS CHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCEEE TATGSAGACQGAGIPPMRLNGVVGIYKAYTTRVGGGPFPTELTDELGEYIRQAGHEFGTT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHCCCC TGRPRRVGWFDAVAARYAAEINGISSIALTKLDVLDDVETLKICTGYRWNDTELDSFPSS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHCCHH ISVLSQVEPIYEEYPGWKTNTSHARTLDELPEAAQRYVRRLSQLVGVRLGMISVGPSREQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHH MVSLQEIF HHHHHHCC >Mature Secondary Structure PVVAVLGAQWGDEGKGRVVDLLATKAKMVIRAAGGSNAGHTVINHLGTFKLHLTPAGIF CEEEEECCCCCCCCCCCEEHHHHHHHHEEEEECCCCCCCHHHHHHCCEEEEEEECCCCC DANVVNIIGAGTVIDPAVLMKELQALREANVSLDQLYISDRAHVVMPYHVSLDALEEKDR CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEEEEECCHHHHHHHCC GANEIGTTKRGIGPAYVDKASRMGIRMGDLLHEETLLSRLTSVLEYKGRVLNKMYGAQPS CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASLHDMYLQYLEFGRQLEAHIVPIHTMVQDALRRDIPILIEGNQGALLDVDYGTFPYVTS CHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCEEE TATGSAGACQGAGIPPMRLNGVVGIYKAYTTRVGGGPFPTELTDELGEYIRQAGHEFGTT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHCCCC TGRPRRVGWFDAVAARYAAEINGISSIALTKLDVLDDVETLKICTGYRWNDTELDSFPSS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHCCHH ISVLSQVEPIYEEYPGWKTNTSHARTLDELPEAAQRYVRRLSQLVGVRLGMISVGPSREQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHH MVSLQEIF HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA