Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901115
Identifier: 159901115
GI number: 159901115
Start: 5886475
End: 5887242
Strand: Direct
Name: 159901115
Synonym: Haur_4603
Alternate gene names: NA
Gene position: 5886475-5887242 (Clockwise)
Preceding gene: 159901106
Following gene: 159901116
Centisome position: 92.75
GC content: 50.39
Gene sequence:
>768_bases ATGATCAAGCAAGCGATGGCTCGTGGAATTGCAGGATTGGCCTTGATTGGATTATTGGCAGCGTGTCAATCGGCAGAATC GACCCAACCAAGTGCAACGACGGCTCCAGCAGCGGCTCACACCCAAATGGCGCATGCCAGCAACACCACCGCCAGTCAGC CAGCCAATAATCCAGCGCTCGATACGGCGCTTGATCCCAGCCGTGGGCAAGAAATTGGCTATGTGTATGAAGCATTTTTA AGCCCACACCAAGAGCCGGGCGAAGAAGAAGATGCTCCAGCGTTTACGCCCGACGAGCTACTTTCAAGCGCTCCATCGCA GCCTCGCGCCAATCGGACTTCACGCGGCCACGGTTTTTTGCGAATTACCAAAGATCTCAGCAAGGCCTATGTTGATGTTA AACTCGAAAACGTCAAACCCGAAGATGTGGTGATGTTTCATATTCACTGTGGCAAGCCCGATATTCTTGGCCCAATCTTG ATCGACTTCGCTTTCTCGGGCAATATTCAAGAAAATTTGGCTGATGGGACGTTTTCGGTCGAGCTAACCAACACCGATAT CGAAAAGGAAAGCGAAGCAGGCTCGGGCGTGTTAGGTTTATTCACAGCTGGTTGCCCAATTGTGCCAGGCTTGCCCGATG AAGTTCAAACAATTTCAGGCATGCAGCACATTGCCGAACAAAGTGAGCTTTACTTCAATTTGCACACCAAAGGCCAAACC TTCTATGGCGATATTCGCGGCAAATTGCAACCAGTCAAAAATCCCTAA
Upstream 100 bases:
>100_bases TAAAATTTTGGGTATTGACACACAGTGTGTCATTTGCGATAATAGCAGTCATGCGGCGCAGGATTGAATCAAAAAAATCA AACATATTAGGAGTGTGTTT
Downstream 100 bases:
>100_bases AACTCCTGTTTGCGATCGTTACGACCCCTCACCCCGTCGCCTTTCAAAGTAGGTTTTAAGTTCCCTCACCCCCGACCCCT CTCCCACTGCGGTGGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT FYGDIRGKLQPVKNP
Sequences:
>Translated_255_residues MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT FYGDIRGKLQPVKNP >Mature_255_residues MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT FYGDIRGKLQPVKNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27167; Mature: 27167
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DTALDPSRGQEIGYVYEAFLSPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE RITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPILIDFAFSGNIQENLADGTFSV EEEHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECCCCHHHHCCCCEEEE ELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE FYGDIRGKLQPVKNP EEEECCCCCCCCCCC >Mature Secondary Structure MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DTALDPSRGQEIGYVYEAFLSPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE RITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPILIDFAFSGNIQENLADGTFSV EEEHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECCCCHHHHCCCCEEEE ELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE FYGDIRGKLQPVKNP EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA