Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901115

Identifier: 159901115

GI number: 159901115

Start: 5886475

End: 5887242

Strand: Direct

Name: 159901115

Synonym: Haur_4603

Alternate gene names: NA

Gene position: 5886475-5887242 (Clockwise)

Preceding gene: 159901106

Following gene: 159901116

Centisome position: 92.75

GC content: 50.39

Gene sequence:

>768_bases
ATGATCAAGCAAGCGATGGCTCGTGGAATTGCAGGATTGGCCTTGATTGGATTATTGGCAGCGTGTCAATCGGCAGAATC
GACCCAACCAAGTGCAACGACGGCTCCAGCAGCGGCTCACACCCAAATGGCGCATGCCAGCAACACCACCGCCAGTCAGC
CAGCCAATAATCCAGCGCTCGATACGGCGCTTGATCCCAGCCGTGGGCAAGAAATTGGCTATGTGTATGAAGCATTTTTA
AGCCCACACCAAGAGCCGGGCGAAGAAGAAGATGCTCCAGCGTTTACGCCCGACGAGCTACTTTCAAGCGCTCCATCGCA
GCCTCGCGCCAATCGGACTTCACGCGGCCACGGTTTTTTGCGAATTACCAAAGATCTCAGCAAGGCCTATGTTGATGTTA
AACTCGAAAACGTCAAACCCGAAGATGTGGTGATGTTTCATATTCACTGTGGCAAGCCCGATATTCTTGGCCCAATCTTG
ATCGACTTCGCTTTCTCGGGCAATATTCAAGAAAATTTGGCTGATGGGACGTTTTCGGTCGAGCTAACCAACACCGATAT
CGAAAAGGAAAGCGAAGCAGGCTCGGGCGTGTTAGGTTTATTCACAGCTGGTTGCCCAATTGTGCCAGGCTTGCCCGATG
AAGTTCAAACAATTTCAGGCATGCAGCACATTGCCGAACAAAGTGAGCTTTACTTCAATTTGCACACCAAAGGCCAAACC
TTCTATGGCGATATTCGCGGCAAATTGCAACCAGTCAAAAATCCCTAA

Upstream 100 bases:

>100_bases
TAAAATTTTGGGTATTGACACACAGTGTGTCATTTGCGATAATAGCAGTCATGCGGCGCAGGATTGAATCAAAAAAATCA
AACATATTAGGAGTGTGTTT

Downstream 100 bases:

>100_bases
AACTCCTGTTTGCGATCGTTACGACCCCTCACCCCGTCGCCTTTCAAAGTAGGTTTTAAGTTCCCTCACCCCCGACCCCT
CTCCCACTGCGGTGGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL
SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL
IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT
FYGDIRGKLQPVKNP

Sequences:

>Translated_255_residues
MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL
SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL
IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT
FYGDIRGKLQPVKNP
>Mature_255_residues
MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPALDTALDPSRGQEIGYVYEAFL
SPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFLRITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPIL
IDFAFSGNIQENLADGTFSVELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT
FYGDIRGKLQPVKNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27167; Mature: 27167

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DTALDPSRGQEIGYVYEAFLSPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE
RITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPILIDFAFSGNIQENLADGTFSV
EEEHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECCCCHHHHCCCCEEEE
ELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT
EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE
FYGDIRGKLQPVKNP
EEEECCCCCCCCCCC
>Mature Secondary Structure
MIKQAMARGIAGLALIGLLAACQSAESTQPSATTAPAAAHTQMAHASNTTASQPANNPAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DTALDPSRGQEIGYVYEAFLSPHQEPGEEEDAPAFTPDELLSSAPSQPRANRTSRGHGFL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE
RITKDLSKAYVDVKLENVKPEDVVMFHIHCGKPDILGPILIDFAFSGNIQENLADGTFSV
EEEHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECCCCHHHHCCCCEEEE
ELTNTDIEKESEAGSGVLGLFTAGCPIVPGLPDEVQTISGMQHIAEQSELYFNLHTKGQT
EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCE
FYGDIRGKLQPVKNP
EEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA