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The map label for this gene is cadC [H]

Identifier: 159901093

GI number: 159901093

Start: 5860396

End: 5860794

Strand: Direct

Name: cadC [H]

Synonym: Haur_4581

Alternate gene names: 159901093

Gene position: 5860396-5860794 (Clockwise)

Preceding gene: 159901086

Following gene: 159901094

Centisome position: 92.34

GC content: 49.12

Gene sequence:

>399_bases
ATGGTTGAACATGAAGATGGAATTAACCCAGCGATGGTTGAACGTGGGCGACAAATGCTCCACGACGACGAAAGCTATTT
TTTAATGGCCGAAACCTTTCGAGCCTTAGCCGATTCGACGCGGGTCAAAATTGTCGGTTGTTTGCTCGAGCAAGAGCTTT
GTACCGCTGATTTGGCGGCAATTTTGAATTATTCCGAGTCGGCGGTTTCGCAGCATTTGCGGGTGCTACGTCAGTTGCGC
TTGGTCAAACAACGCCGCGAAGGCAAATTGGTATTTTATAGCCTTGATGATGACCATGTGCGAGTGCTCGTGCTGGTTTG
TCTGAATCATATTCGCCATGGCTCTACGCCTGATCCATCGGTTGCGCCCATTTTAGCTGTGTTGGAGGAAGAACGATGA

Upstream 100 bases:

>100_bases
TTGATACGTGGTCTAAAAGAAAAGGTTGCGAAATACTTGACGGGTTGTGTTCGATTTGATAATTTAGCAATTGTGCAATC
GTTCATTTGAGGTTTGGCGT

Downstream 100 bases:

>100_bases
GCGGACATCACGACCACGGACATCATCACCATCATAGCGTGCCTGCCGATGCTGGTGGCCGCTTAATTTGGGCTTTGGCA
ATCACGTTTGGCTTTGTGGG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVEHEDGINPAMVERGRQMLHDDESYFLMAETFRALADSTRVKIVGCLLEQELCTADLAAILNYSESAVSQHLRVLRQLR
LVKQRREGKLVFYSLDDDHVRVLVLVCLNHIRHGSTPDPSVAPILAVLEEER

Sequences:

>Translated_132_residues
MVEHEDGINPAMVERGRQMLHDDESYFLMAETFRALADSTRVKIVGCLLEQELCTADLAAILNYSESAVSQHLRVLRQLR
LVKQRREGKLVFYSLDDDHVRVLVLVCLNHIRHGSTPDPSVAPILAVLEEER
>Mature_132_residues
MVEHEDGINPAMVERGRQMLHDDESYFLMAETFRALADSTRVKIVGCLLEQELCTADLAAILNYSESAVSQHLRVLRQLR
LVKQRREGKLVFYSLDDDHVRVLVLVCLNHIRHGSTPDPSVAPILAVLEEER

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 15023; Mature: 15023

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEHEDGINPAMVERGRQMLHDDESYFLMAETFRALADSTRVKIVGCLLEQELCTADLAA
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILNYSESAVSQHLRVLRQLRLVKQRREGKLVFYSLDDDHVRVLVLVCLNHIRHGSTPDPS
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCH
VAPILAVLEEER
HHHHHHHHHCCC
>Mature Secondary Structure
MVEHEDGINPAMVERGRQMLHDDESYFLMAETFRALADSTRVKIVGCLLEQELCTADLAA
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILNYSESAVSQHLRVLRQLRLVKQRREGKLVFYSLDDDHVRVLVLVCLNHIRHGSTPDPS
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCH
VAPILAVLEEER
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA