Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900950
Identifier: 159900950
GI number: 159900950
Start: 5677775
End: 5678248
Strand: Direct
Name: 159900950
Synonym: Haur_4437
Alternate gene names: NA
Gene position: 5677775-5678248 (Clockwise)
Preceding gene: 159900949
Following gene: 159900951
Centisome position: 89.46
GC content: 46.62
Gene sequence:
>474_bases ATGTTAACTGCTAGCGAACGCGATGCACTTGTAGCGACCATTTTACACTTGCCTGCTCAACTACATGCCTTGGTTGATCG TTTGGATCTTGAGCAATTGAACACGGCCTATATATCGAATGAATGGACAATCGCCCAAAATATCCATCATCTTGCTGATA CACAGATGACTCTGTTTATTCGCATAAAACTCTTGTTGTTGGAAGATTACCCAACGCTCAAGCCGTTTGATCAGGATACA TGGGTCACAACTGTTGATAGCGTTGGCCCAATCGAAACCTCCTTGACGATTTTACAAGGCTTGCAAGAACGGGCAGCAAC CTTGGTAAATTCACTTGATTTGGCCAGTTTTGAACGGACTGGTTGGCATCCCGAAAATGGCGAAACGACGCTTGAGCAAG TGGTGCGGTACTATGCCCGTCACGGCGAGCTGCATCTTGAGCAAATTGGTCAGGTGCTAGCAGCAGCCAAATGA
Upstream 100 bases:
>100_bases AGCACTGCCGTGGCGTTTCTTGATCGGATCATCAATTATTGGAGCATCGTGATTTTGGGGTTGGTTTTGTATCTGTTTAG CAAACGAAAGTGAGCCAGCC
Downstream 100 bases:
>100_bases TCCACGAAGAACACGAAGGGCACGCAGAATCGAAACCGCGAAGAACGCGAAGGAGTGGGGGGATGCGACTTACAAGGGTA GGTTTTTAACAATGCTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLTASERDALVATILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFIRIKLLLLEDYPTLKPFDQDT WVTTVDSVGPIETSLTILQGLQERAATLVNSLDLASFERTGWHPENGETTLEQVVRYYARHGELHLEQIGQVLAAAK
Sequences:
>Translated_157_residues MLTASERDALVATILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFIRIKLLLLEDYPTLKPFDQDT WVTTVDSVGPIETSLTILQGLQERAATLVNSLDLASFERTGWHPENGETTLEQVVRYYARHGELHLEQIGQVLAAAK >Mature_157_residues MLTASERDALVATILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFIRIKLLLLEDYPTLKPFDQDT WVTTVDSVGPIETSLTILQGLQERAATLVNSLDLASFERTGWHPENGETTLEQVVRYYARHGELHLEQIGQVLAAAK
Specific function: Possible metal-dependent hydrolase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metal hydrolase yfiT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007837 [H]
Pfam domain/function: PF05163 DinB [H]
EC number: NA
Molecular weight: Translated: 17695; Mature: 17695
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTASERDALVATILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RIKLLLLEDYPTLKPFDQDTWVTTVDSVGPIETSLTILQGLQERAATLVNSLDLASFERT HHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWHPENGETTLEQVVRYYARHGELHLEQIGQVLAAAK CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLTASERDALVATILHLPAQLHALVDRLDLEQLNTAYISNEWTIAQNIHHLADTQMTLFI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RIKLLLLEDYPTLKPFDQDTWVTTVDSVGPIETSLTILQGLQERAATLVNSLDLASFERT HHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWHPENGETTLEQVVRYYARHGELHLEQIGQVLAAAK CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA