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The map label for this gene is 159900949

Identifier: 159900949

GI number: 159900949

Start: 5676607

End: 5677767

Strand: Direct

Name: 159900949

Synonym: Haur_4436

Alternate gene names: NA

Gene position: 5676607-5677767 (Clockwise)

Preceding gene: 159900948

Following gene: 159900950

Centisome position: 89.44

GC content: 48.84

Gene sequence:

>1161_bases
ATGAAATCGCAAACGCAAGCAAATCCTGCTAGTTTACGCCCTGAGCAAACCAACCAAGGCTTGCCGCGTCCGGCTGAAAC
CGAATCGCTCGAACAATTGGTTGAACAGGCCGCCGAAGCTGCACCGTTACCTGCCGATGCACTGCCCGACGATTTAGCCG
AGGTGCGTTCGAGCGGCTTTTCGCTACGTGATAAATTTCTGAATGTTAAATCCTTGGCATCGTTTGGCATTGCTTTTGCG
ATTCTGGGCTTAGCATTTTGGCGAGCCGATATTAACCTCGCTGAGATGTGGCAGCAGATTCTTCAGACCAATCTTTGGCT
GTATAGCGCTGGTTTTATTGTTTTCTATGGTCTTTTTCCAATTCGCGCCTGGCGCTGGCGGATTATCTTGCGTAGCGCTG
GCTTTGAGGTTGATAGCCCGCAATCACGTAAAAATTGGTCGGGGATTGCGGCATTAAGCGAGTTTATTGGGCTTTCGTGG
TTTGCCAACTGCGTCGTGCCTGCCAAACTGGGCGATGCCTATCGGGGTTATTTGGTTAAGAAAAACGGCAACGCCTCATT
CTCGCGCACCTTGGGTACAATTTTCGCCGAACGCATTGTCGATATGATTGTGCTGTTTGGCATGTTGGTAGTTTCGGGCT
TATTGGTCTTTCAAGGCCATCTCAATAGCTGGACCGAAAAATTATTTATCATCGGGATTGTCTTTACAATTTTGCTGGTG
ATTGGTTTGATGTCGATGCGCTATCTGAGTCCGTTGATTCGCCGCGCCTTGCCCCAACGTTTCCACGATTTTTATGCTCG
CTTCGAGGAAGGCACGCTTTCATCATTTCGACCTTCACGCCTGCCAATTTTGCTGATTTTGACAATCATTGTTTGGCTGG
GCGAGTCGATGCGCTTGTTTTTCGTAATTGAGGCCATGGGTGGTTTAGGCTTATCGTTATCAGCGATTATTTTTGTGGCC
TTAGCTAGCTCATTGTTGACCGCCGTGCCAGCCTTGCCTGGTGGCTTGGGCTTGGTCGAGGTCGGGATTGCTGGTGTGAT
GATGTTGTTTAGTGTCGGCCAAACCACTAGCACTGCCGTGGCGTTTCTTGATCGGATCATCAATTATTGGAGCATCGTGA
TTTTGGGGTTGGTTTTGTATCTGTTTAGCAAACGAAAGTGA

Upstream 100 bases:

>100_bases
AACCATCGATATCGAGGATGGCCTAGAGCGCTATTGGCATTGGTATAAAACCGAGTACGATTGCTAGATCGGCATCGTGT
TAGAAACAAACTGGATCATT

Downstream 100 bases:

>100_bases
GCCAGCCATGTTAACTGCTAGCGAACGCGATGCACTTGTAGCGACCATTTTACACTTGCCTGCTCAACTACATGCCTTGG
TTGATCGTTTGGATCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKSQTQANPASLRPEQTNQGLPRPAETESLEQLVEQAAEAAPLPADALPDDLAEVRSSGFSLRDKFLNVKSLASFGIAFA
ILGLAFWRADINLAEMWQQILQTNLWLYSAGFIVFYGLFPIRAWRWRIILRSAGFEVDSPQSRKNWSGIAALSEFIGLSW
FANCVVPAKLGDAYRGYLVKKNGNASFSRTLGTIFAERIVDMIVLFGMLVVSGLLVFQGHLNSWTEKLFIIGIVFTILLV
IGLMSMRYLSPLIRRALPQRFHDFYARFEEGTLSSFRPSRLPILLILTIIVWLGESMRLFFVIEAMGGLGLSLSAIIFVA
LASSLLTAVPALPGGLGLVEVGIAGVMMLFSVGQTTSTAVAFLDRIINYWSIVILGLVLYLFSKRK

Sequences:

>Translated_386_residues
MKSQTQANPASLRPEQTNQGLPRPAETESLEQLVEQAAEAAPLPADALPDDLAEVRSSGFSLRDKFLNVKSLASFGIAFA
ILGLAFWRADINLAEMWQQILQTNLWLYSAGFIVFYGLFPIRAWRWRIILRSAGFEVDSPQSRKNWSGIAALSEFIGLSW
FANCVVPAKLGDAYRGYLVKKNGNASFSRTLGTIFAERIVDMIVLFGMLVVSGLLVFQGHLNSWTEKLFIIGIVFTILLV
IGLMSMRYLSPLIRRALPQRFHDFYARFEEGTLSSFRPSRLPILLILTIIVWLGESMRLFFVIEAMGGLGLSLSAIIFVA
LASSLLTAVPALPGGLGLVEVGIAGVMMLFSVGQTTSTAVAFLDRIINYWSIVILGLVLYLFSKRK
>Mature_386_residues
MKSQTQANPASLRPEQTNQGLPRPAETESLEQLVEQAAEAAPLPADALPDDLAEVRSSGFSLRDKFLNVKSLASFGIAFA
ILGLAFWRADINLAEMWQQILQTNLWLYSAGFIVFYGLFPIRAWRWRIILRSAGFEVDSPQSRKNWSGIAALSEFIGLSW
FANCVVPAKLGDAYRGYLVKKNGNASFSRTLGTIFAERIVDMIVLFGMLVVSGLLVFQGHLNSWTEKLFIIGIVFTILLV
IGLMSMRYLSPLIRRALPQRFHDFYARFEEGTLSSFRPSRLPILLILTIIVWLGESMRLFFVIEAMGGLGLSLSAIIFVA
LASSLLTAVPALPGGLGLVEVGIAGVMMLFSVGQTTSTAVAFLDRIINYWSIVILGLVLYLFSKRK

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 42710; Mature: 42710

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQTQANPASLRPEQTNQGLPRPAETESLEQLVEQAAEAAPLPADALPDDLAEVRSSGF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
SLRDKFLNVKSLASFGIAFAILGLAFWRADINLAEMWQQILQTNLWLYSAGFIVFYGLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAWRWRIILRSAGFEVDSPQSRKNWSGIAALSEFIGLSWFANCVVPAKLGDAYRGYLVK
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEE
KNGNASFSRTLGTIFAERIVDMIVLFGMLVVSGLLVFQGHLNSWTEKLFIIGIVFTILLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLMSMRYLSPLIRRALPQRFHDFYARFEEGTLSSFRPSRLPILLILTIIVWLGESMRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
FVIEAMGGLGLSLSAIIFVALASSLLTAVPALPGGLGLVEVGIAGVMMLFSVGQTTSTAV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
AFLDRIINYWSIVILGLVLYLFSKRK
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSQTQANPASLRPEQTNQGLPRPAETESLEQLVEQAAEAAPLPADALPDDLAEVRSSGF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
SLRDKFLNVKSLASFGIAFAILGLAFWRADINLAEMWQQILQTNLWLYSAGFIVFYGLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAWRWRIILRSAGFEVDSPQSRKNWSGIAALSEFIGLSWFANCVVPAKLGDAYRGYLVK
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEE
KNGNASFSRTLGTIFAERIVDMIVLFGMLVVSGLLVFQGHLNSWTEKLFIIGIVFTILLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLMSMRYLSPLIRRALPQRFHDFYARFEEGTLSSFRPSRLPILLILTIIVWLGESMRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
FVIEAMGGLGLSLSAIIFVALASSLLTAVPALPGGLGLVEVGIAGVMMLFSVGQTTSTAV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
AFLDRIINYWSIVILGLVLYLFSKRK
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]