Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is leuS
Identifier: 159900932
GI number: 159900932
Start: 5654065
End: 5656509
Strand: Direct
Name: leuS
Synonym: Haur_4419
Alternate gene names: 159900932
Gene position: 5654065-5656509 (Clockwise)
Preceding gene: 159900929
Following gene: 159900933
Centisome position: 89.09
GC content: 50.88
Gene sequence:
>2445_bases ATGGCCACTCGCTATGATAGTAGCATCACCGAGCCAAAATGGCGCGAACGTTGGGAACGCGACGGCATTTATCGCTTCGA GCCAGACAGCGATAAGCCTAAACACTATGCCGTCACTATGTTGCCCTATCCATCGGGCAATTTGCACATTGGCCATTGGT ATGCCATGTCGCCCAGCGACGTGCATGCCCGCTACATGCGCATGCGTGGCTACAACGTCTTTTTCCCAATGGGCTTCGAT GCCTTTGGCCTGCCCGCTGAAAACGCCGCAATCAAAAACAACTTAGATCCGCGCAAATGGACCTATTCCAACATTGAATA TATGCGCGGCCAATTGCAATCGATGGGCATGATGGTCGATTGGGATCAGCAAATTGTTAGCGCCGACCCTGAATATTATC GCTGGAATCAGTGGTTTTTTATTCAGTTTTTCAAGCGTGGCTTAGCCTACAAAAAATTCTCAGCCGTCGATTGGTGTCCC AAGTGTAATACAACCTTGGCCCGCGAACAGGTTGTGGGCGATGAGCGGCGCTGTGAACGCTGCGATAGCTTAGTCACCAA GCGCGATTTGGATCAATGGTATTTCAAAATTACTTCATACGCTGATGAATTGCTGAATTTCTCAGAGTTGGATTGGCCTG AGCGCATCACAACCATGCAGCGCAACTGGATTGGTCGCTCAGAAGGAGCTGAAATCAGCTTCAAATCTGAGGCTGGCGAC CCAATTACGGTCTTTTCAACTCGCCCCGACACCTTGTGGGGTGCAACCTTTATGGTGTTGGCTCCGGAACATCCGTTGGT TGCCAAATTGACCAGCGCCGAGCAAAAAGCCAGCGTCGATGCCTATGTAGCCGAAGCAATTCGCAAAACCGAAGTTGAGC GCCAATCGACCGACGACGAAAAGCCCAAAACTGGCGTGTGGATCGGTGCGTATGCGATCAATCCAGCGAGCCAAGAGCGC GTGCCAATTTGGATTGCCGATTATGTGTTGATGACCTATGGCACTGGCGCGATCATGGCCGTGCCCGGCCACGATGAACG CGATTTTGCCTTTGCCAAAACCTTTGGCTTGGCAATCAAACGCGTAGTTACCCAATCTGAGCAAACTGCCGAAACTCCCT TGGAAGCAGCCGAGCCAGCCTATGGCACGGTCGTTAATTCAGGCCAAATCGATGGCTTGAGCTCAGCCGAGGCCAAAGAA GCTGTGATTAACTGGCTGGAAGCTGAGCAATTGGGCAAACGGGCGATTAATTATCGTTTGCGCGATTGGCTGGTCAGCCG CCAACGCTATTGGGGTACGCCAATCCCGATGATTTATTGCCCAACATGTGGTACTGTACCCGTGCCAGAAGATCAATTAC CATTGTTGCTGCCCGATAGTGTTGATTTCAAGCCAACAGGCGAATCGCCCTTGAAATTGCACCCAACCTGGCGCTTTACC ACATGTCCAACCTGTGGCGGCGAGGCTGAGCGCGACACCGACACCATGGATACATTTGTTGATTCGTCGTGGTATCAAGT GCGCTACTTAAGCCCGCACGAAACGAATGCGCCCTTTACCAAAGCGATTGCCGATAAATGGTTGCCAGTTGATCAATATA CGGGTGGTCGCGAACATGCCGTGATGCACTTGCTGTACACCCGTTTTTGGTGGAAAGCCATGCGTGATATGGGCTTAGTC AGCGCTAACGAGCCAATGACCCGTTTGATCAACCAAGGGGTGATTTTAGGCGAAGATAGTAATAAAATGTCGAAATCGCG CGGCAATGTGATTGACCCAGATATGCTGGTAGCCCAATATGGTGCTGACACCGTGCGCACTTTCTTGATGTTTATTGGCC CGTGGGAGCAAGGCGGTCCATGGAATAATCGCGGGATCGAAGGTTGTGTGCGCTTCTTGGATCGGGCTTGGCGGGTCGTG ACTGATACGCCACAACGCCACGATGCTGTGGGCGATGCTAGCACATTGGAGCGCCAAACCCATCGGATCATCAAAAAAGT TGGCGACGATTTGCAGCGTTTTGCCTTTAACACCGCCATTGCTGGCTTGATGGAGTTCGTCAACGAATTGATGAAAGTCC GCGAAACCGATGTGTATGGCACTACAACATGGCGCAAGGCCACCGAAACCTTGACCTTGTTGTTAGCACCAATCGCTCCC CACATTGCTGAAGAATTATGGGAATTTTTGGGCAACAGCCAAAGCGTCCATTTGCAAGCTTGGCCAAGCTACGATGAAAC CTTATTGATCGACGAATCGATTGAATTGCCAGTGCAAATAAATGGTAAAGTTCGCGGTAAAATACAGGTAGCCGCCACCG CCGATGAACCAAGCATCATTGCAACCGCTTTGGCTGATGAAAAGATTGCCCCCTTGGTCGCGGGCAAAACCATCGTCAAG CAAATTGTGGTACCAAATCGCTTGGTCAATATCGTAATCAAATAA
Upstream 100 bases:
>100_bases TCATGTTTAAAACCTATCCTTGACAGAAGCGAGCCAGGGGGTGAGGGGAAAAGTTTTAGATTTTGCCAATTGCAGATATT TTTTAGCCAAGGAGTTGATG
Downstream 100 bases:
>100_bases GTTTTTGGCCAGACAACGGAAGGGTCGTAGAGAAACCCTTCCGTTGGCCAACCCAAGAAGCGAGATAGCTTGGCAATTCG GAAACGTTGCCAACATTCAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS
Number of amino acids: Translated: 814; Mature: 813
Protein sequence:
>814_residues MATRYDSSITEPKWRERWERDGIYRFEPDSDKPKHYAVTMLPYPSGNLHIGHWYAMSPSDVHARYMRMRGYNVFFPMGFD AFGLPAENAAIKNNLDPRKWTYSNIEYMRGQLQSMGMMVDWDQQIVSADPEYYRWNQWFFIQFFKRGLAYKKFSAVDWCP KCNTTLAREQVVGDERRCERCDSLVTKRDLDQWYFKITSYADELLNFSELDWPERITTMQRNWIGRSEGAEISFKSEAGD PITVFSTRPDTLWGATFMVLAPEHPLVAKLTSAEQKASVDAYVAEAIRKTEVERQSTDDEKPKTGVWIGAYAINPASQER VPIWIADYVLMTYGTGAIMAVPGHDERDFAFAKTFGLAIKRVVTQSEQTAETPLEAAEPAYGTVVNSGQIDGLSSAEAKE AVINWLEAEQLGKRAINYRLRDWLVSRQRYWGTPIPMIYCPTCGTVPVPEDQLPLLLPDSVDFKPTGESPLKLHPTWRFT TCPTCGGEAERDTDTMDTFVDSSWYQVRYLSPHETNAPFTKAIADKWLPVDQYTGGREHAVMHLLYTRFWWKAMRDMGLV SANEPMTRLINQGVILGEDSNKMSKSRGNVIDPDMLVAQYGADTVRTFLMFIGPWEQGGPWNNRGIEGCVRFLDRAWRVV TDTPQRHDAVGDASTLERQTHRIIKKVGDDLQRFAFNTAIAGLMEFVNELMKVRETDVYGTTTWRKATETLTLLLAPIAP HIAEELWEFLGNSQSVHLQAWPSYDETLLIDESIELPVQINGKVRGKIQVAATADEPSIIATALADEKIAPLVAGKTIVK QIVVPNRLVNIVIK
Sequences:
>Translated_814_residues MATRYDSSITEPKWRERWERDGIYRFEPDSDKPKHYAVTMLPYPSGNLHIGHWYAMSPSDVHARYMRMRGYNVFFPMGFD AFGLPAENAAIKNNLDPRKWTYSNIEYMRGQLQSMGMMVDWDQQIVSADPEYYRWNQWFFIQFFKRGLAYKKFSAVDWCP KCNTTLAREQVVGDERRCERCDSLVTKRDLDQWYFKITSYADELLNFSELDWPERITTMQRNWIGRSEGAEISFKSEAGD PITVFSTRPDTLWGATFMVLAPEHPLVAKLTSAEQKASVDAYVAEAIRKTEVERQSTDDEKPKTGVWIGAYAINPASQER VPIWIADYVLMTYGTGAIMAVPGHDERDFAFAKTFGLAIKRVVTQSEQTAETPLEAAEPAYGTVVNSGQIDGLSSAEAKE AVINWLEAEQLGKRAINYRLRDWLVSRQRYWGTPIPMIYCPTCGTVPVPEDQLPLLLPDSVDFKPTGESPLKLHPTWRFT TCPTCGGEAERDTDTMDTFVDSSWYQVRYLSPHETNAPFTKAIADKWLPVDQYTGGREHAVMHLLYTRFWWKAMRDMGLV SANEPMTRLINQGVILGEDSNKMSKSRGNVIDPDMLVAQYGADTVRTFLMFIGPWEQGGPWNNRGIEGCVRFLDRAWRVV TDTPQRHDAVGDASTLERQTHRIIKKVGDDLQRFAFNTAIAGLMEFVNELMKVRETDVYGTTTWRKATETLTLLLAPIAP HIAEELWEFLGNSQSVHLQAWPSYDETLLIDESIELPVQINGKVRGKIQVAATADEPSIIATALADEKIAPLVAGKTIVK QIVVPNRLVNIVIK >Mature_813_residues ATRYDSSITEPKWRERWERDGIYRFEPDSDKPKHYAVTMLPYPSGNLHIGHWYAMSPSDVHARYMRMRGYNVFFPMGFDA FGLPAENAAIKNNLDPRKWTYSNIEYMRGQLQSMGMMVDWDQQIVSADPEYYRWNQWFFIQFFKRGLAYKKFSAVDWCPK CNTTLAREQVVGDERRCERCDSLVTKRDLDQWYFKITSYADELLNFSELDWPERITTMQRNWIGRSEGAEISFKSEAGDP ITVFSTRPDTLWGATFMVLAPEHPLVAKLTSAEQKASVDAYVAEAIRKTEVERQSTDDEKPKTGVWIGAYAINPASQERV PIWIADYVLMTYGTGAIMAVPGHDERDFAFAKTFGLAIKRVVTQSEQTAETPLEAAEPAYGTVVNSGQIDGLSSAEAKEA VINWLEAEQLGKRAINYRLRDWLVSRQRYWGTPIPMIYCPTCGTVPVPEDQLPLLLPDSVDFKPTGESPLKLHPTWRFTT CPTCGGEAERDTDTMDTFVDSSWYQVRYLSPHETNAPFTKAIADKWLPVDQYTGGREHAVMHLLYTRFWWKAMRDMGLVS ANEPMTRLINQGVILGEDSNKMSKSRGNVIDPDMLVAQYGADTVRTFLMFIGPWEQGGPWNNRGIEGCVRFLDRAWRVVT DTPQRHDAVGDASTLERQTHRIIKKVGDDLQRFAFNTAIAGLMEFVNELMKVRETDVYGTTTWRKATETLTLLLAPIAPH IAEELWEFLGNSQSVHLQAWPSYDETLLIDESIELPVQINGKVRGKIQVAATADEPSIIATALADEKIAPLVAGKTIVKQ IVVPNRLVNIVIK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI7661872, Length=886, Percent_Identity=33.8600451467269, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI46852147, Length=828, Percent_Identity=22.8260869565217, Blast_Score=91, Evalue=5e-18, Organism=Escherichia coli, GI1786861, Length=868, Percent_Identity=41.9354838709677, Blast_Score=672, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=383, Percent_Identity=21.9321148825065, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71997517, Length=814, Percent_Identity=28.7469287469287, Blast_Score=305, Evalue=6e-83, Organism=Caenorhabditis elegans, GI71997510, Length=814, Percent_Identity=28.7469287469287, Blast_Score=305, Evalue=7e-83, Organism=Caenorhabditis elegans, GI212645227, Length=381, Percent_Identity=28.0839895013123, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17510661, Length=433, Percent_Identity=21.0161662817552, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323414, Length=843, Percent_Identity=34.4009489916963, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6321531, Length=676, Percent_Identity=21.4497041420118, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI21355409, Length=839, Percent_Identity=30.3933253873659, Blast_Score=374, Evalue=1e-103,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYL_HERA2 (A9AZ11)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001547179.1 - ProteinModelPortal: A9AZ11 - SMR: A9AZ11 - GeneID: 5736270 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_4419 - HOGENOM: HBG693845 - OMA: ERGNFPV - BioCyc: HAUR316274:HAUR_4419-MONOMER - GO: GO:0005737 - HAMAP: MF_00049_B - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11946:SF7 - PRINTS: PR00985 - TIGRFAMs: TIGR00396
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; SSF47323 tRNAsyn_1a_bind; SSF50677 ValRS_IleRS_edit
EC number: =6.1.1.4
Molecular weight: Translated: 92644; Mature: 92513
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 585-585
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRYDSSITEPKWRERWERDGIYRFEPDSDKPKHYAVTMLPYPSGNLHIGHWYAMSPSD CCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCHH VHARYMRMRGYNVFFPMGFDAFGLPAENAAIKNNLDPRKWTYSNIEYMRGQLQSMGMMVD HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCEECCHHHHHHHHHHHCCCEEE WDQQIVSADPEYYRWNQWFFIQFFKRGLAYKKFSAVDWCPKCNTTLAREQVVGDERRCER CCHHHHCCCCCCEECCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHH CDSLVTKRDLDQWYFKITSYADELLNFSELDWPERITTMQRNWIGRSEGAEISFKSEAGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC PITVFSTRPDTLWGATFMVLAPEHPLVAKLTSAEQKASVDAYVAEAIRKTEVERQSTDDE EEEEEECCCCCHHCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPKTGVWIGAYAINPASQERVPIWIADYVLMTYGTGAIMAVPGHDERDFAFAKTFGLAIK CCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RVVTQSEQTAETPLEAAEPAYGTVVNSGQIDGLSSAEAKEAVINWLEAEQLGKRAINYRL HHHHCCHHHHCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDWLVSRQRYWGTPIPMIYCPTCGTVPVPEDQLPLLLPDSVDFKPTGESPLKLHPTWRFT HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCEEEE TCPTCGGEAERDTDTMDTFVDSSWYQVRYLSPHETNAPFTKAIADKWLPVDQYTGGREHA ECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHH VMHLLYTRFWWKAMRDMGLVSANEPMTRLINQGVILGEDSNKMSKSRGNVIDPDMLVAQY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEECCCCHHHHCCCCCCCHHHHHHHH GADTVRTFLMFIGPWEQGGPWNNRGIEGCVRFLDRAWRVVTDTPQRHDAVGDASTLERQT CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHCCCCCHHHHHHHH HRIIKKVGDDLQRFAFNTAIAGLMEFVNELMKVRETDVYGTTTWRKATETLTLLLAPIAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH HIAEELWEFLGNSQSVHLQAWPSYDETLLIDESIELPVQINGKVRGKIQVAATADEPSII HHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCEEECCEEEEEEEEEEECCCCCEE ATALADEKIAPLVAGKTIVKQIVVPNRLVNIVIK EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure ATRYDSSITEPKWRERWERDGIYRFEPDSDKPKHYAVTMLPYPSGNLHIGHWYAMSPSD CCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCHH VHARYMRMRGYNVFFPMGFDAFGLPAENAAIKNNLDPRKWTYSNIEYMRGQLQSMGMMVD HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCEECCHHHHHHHHHHHCCCEEE WDQQIVSADPEYYRWNQWFFIQFFKRGLAYKKFSAVDWCPKCNTTLAREQVVGDERRCER CCHHHHCCCCCCEECCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHH CDSLVTKRDLDQWYFKITSYADELLNFSELDWPERITTMQRNWIGRSEGAEISFKSEAGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC PITVFSTRPDTLWGATFMVLAPEHPLVAKLTSAEQKASVDAYVAEAIRKTEVERQSTDDE EEEEEECCCCCHHCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPKTGVWIGAYAINPASQERVPIWIADYVLMTYGTGAIMAVPGHDERDFAFAKTFGLAIK CCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RVVTQSEQTAETPLEAAEPAYGTVVNSGQIDGLSSAEAKEAVINWLEAEQLGKRAINYRL HHHHCCHHHHCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDWLVSRQRYWGTPIPMIYCPTCGTVPVPEDQLPLLLPDSVDFKPTGESPLKLHPTWRFT HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCEEEE TCPTCGGEAERDTDTMDTFVDSSWYQVRYLSPHETNAPFTKAIADKWLPVDQYTGGREHA ECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHH VMHLLYTRFWWKAMRDMGLVSANEPMTRLINQGVILGEDSNKMSKSRGNVIDPDMLVAQY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEECCCCHHHHCCCCCCCHHHHHHHH GADTVRTFLMFIGPWEQGGPWNNRGIEGCVRFLDRAWRVVTDTPQRHDAVGDASTLERQT CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHCCCCCHHHHHHHH HRIIKKVGDDLQRFAFNTAIAGLMEFVNELMKVRETDVYGTTTWRKATETLTLLLAPIAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH HIAEELWEFLGNSQSVHLQAWPSYDETLLIDESIELPVQINGKVRGKIQVAATADEPSII HHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCEEECCEEEEEEEEEEECCCCCEE ATALADEKIAPLVAGKTIVKQIVVPNRLVNIVIK EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA