Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900677
Identifier: 159900677
GI number: 159900677
Start: 5310984
End: 5311388
Strand: Direct
Name: 159900677
Synonym: Haur_4164
Alternate gene names: NA
Gene position: 5310984-5311388 (Clockwise)
Preceding gene: 159900676
Following gene: 159900678
Centisome position: 83.68
GC content: 52.1
Gene sequence:
>405_bases ATGATTGCAAATGCGCGGATTCGATTGATTGGCTTGGTTGGTTTGGGAGCGTTGCTCGGGGCAGTTGGGGCGTTTATGGC CTACCAATCACGGGCAATTGCACCGAGTCCTGAGCAACTCAAGCCCTATGTTTGGGCGGTAGTAGCCGTGCCATTGGGCA GCTTCATTGGCAGCTTACTGGGCCAATGGCGCTTGTATCGGCCATTTGCTGGTTGGCTGGGCTTGACCTACCTGCTCAGT TTGTTTGCAGCAGCCCGTTTAGAGCGGGTTTTTGTTGGCCAAGAGGCTGCTGTGGCTAATGGTCATGCCAGTTATTTAAT TTTAGCGATTATCTTGCAAAGTATTGGCGCATTGCTGGTAGCATGGCGATTAAGCGCAACTGCCACATCAACGCCAATTG CCTAG
Upstream 100 bases:
>100_bases CGCCTACGCCAACCCCTACGCTAACTCCATCGCCAACTTGGACGCTCACGCCGAGCACCACCCCAACTGTTGAGCCAACA GCGGAGGTTACTGCCACACC
Downstream 100 bases:
>100_bases CGCCAAGGAGACGACACAGCTCATGAAAGGTTTAGTTCTGAGTGGTGGTAAAGGCACACGCCTGCGCCCAATCACCTATA CCAGCGCCAAGCAATTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIANARIRLIGLVGLGALLGAVGAFMAYQSRAIAPSPEQLKPYVWAVVAVPLGSFIGSLLGQWRLYRPFAGWLGLTYLLS LFAAARLERVFVGQEAAVANGHASYLILAIILQSIGALLVAWRLSATATSTPIA
Sequences:
>Translated_134_residues MIANARIRLIGLVGLGALLGAVGAFMAYQSRAIAPSPEQLKPYVWAVVAVPLGSFIGSLLGQWRLYRPFAGWLGLTYLLS LFAAARLERVFVGQEAAVANGHASYLILAIILQSIGALLVAWRLSATATSTPIA >Mature_134_residues MIANARIRLIGLVGLGALLGAVGAFMAYQSRAIAPSPEQLKPYVWAVVAVPLGSFIGSLLGQWRLYRPFAGWLGLTYLLS LFAAARLERVFVGQEAAVANGHASYLILAIILQSIGALLVAWRLSATATSTPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14179; Mature: 14179
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIANARIRLIGLVGLGALLGAVGAFMAYQSRAIAPSPEQLKPYVWAVVAVPLGSFIGSLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GQWRLYRPFAGWLGLTYLLSLFAAARLERVFVGQEAAVANGHASYLILAIILQSIGALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHH AWRLSATATSTPIA HHHHHCCCCCCCCC >Mature Secondary Structure MIANARIRLIGLVGLGALLGAVGAFMAYQSRAIAPSPEQLKPYVWAVVAVPLGSFIGSLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GQWRLYRPFAGWLGLTYLLSLFAAARLERVFVGQEAAVANGHASYLILAIILQSIGALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHH AWRLSATATSTPIA HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA