Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900676
Identifier: 159900676
GI number: 159900676
Start: 5310370
End: 5310987
Strand: Direct
Name: 159900676
Synonym: Haur_4163
Alternate gene names: NA
Gene position: 5310370-5310987 (Clockwise)
Preceding gene: 159900675
Following gene: 159900677
Centisome position: 83.67
GC content: 53.07
Gene sequence:
>618_bases ATGTGCTCAAGATCGTCAGCCGTGATCCCGATAAGGTTGTGGTGGTTTCCGAAGCCGAAACCCTCAATCCTGATAGCAAA CCAGAATCATATGCCTAATTGGTCGTTGACACAACTGCGTCAATTGTTGCTGATCGGCCTGTTAGCGCCATTGCTAACAG GCTGTTTGCTGATGGCTGGGCGTAACGAGCAAGCCACCATTACCGCCGAACTTGGTTCGCAGAATGTTGAGTTTGTCAGC AGCGATACCAACGGCGAGGCCGTGTTGCAAGCGCTGGATATTGGCACATTGCCAATGTTGCTCGATGTAACCTTTAATGC CCAAGTTGCCAGCGGCGAGTTGGTGATCGAGGTGTTGAGTGGCGAACAAGCCAATGTAGCGTTTACTGTAGTTGCTTCAG CCGAGGGTAGCAGCCAACGCGGCATCGTGATGAGCAATGATGTTGGCGATTTACAATACCGCGTGCGTTCAACCAACGCT CGTAATGGCATTTATCGCATCAGCTATCAGCCGCCGCCTACGCCAACCCCTACGCTAACTCCATCGCCAACTTGGACGCT CACGCCGAGCACCACCCCAACTGTTGAGCCAACAGCGGAGGTTACTGCCACACCATGA
Upstream 100 bases:
>100_bases AATAACATGGCAAAATTGCTTTGCCCAGCATGTAAAAAAGCCCTCAAGCTCAGCCCAGTGATGCGGGTTGGGGCGCAAGT TGGCTGCGTCAACTGCGATA
Downstream 100 bases:
>100_bases TTGCAAATGCGCGGATTCGATTGATTGGCTTGGTTGGTTTGGGAGCGTTGCTCGGGGCAGTTGGGGCGTTTATGGCCTAC CAATCACGGGCAATTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MCSRSSAVIPIRLWWFPKPKPSILIANQNHMPNWSLTQLRQLLLIGLLAPLLTGCLLMAGRNEQATITAELGSQNVEFVS SDTNGEAVLQALDIGTLPMLLDVTFNAQVASGELVIEVLSGEQANVAFTVVASAEGSSQRGIVMSNDVGDLQYRVRSTNA RNGIYRISYQPPPTPTPTLTPSPTWTLTPSTTPTVEPTAEVTATP
Sequences:
>Translated_205_residues MCSRSSAVIPIRLWWFPKPKPSILIANQNHMPNWSLTQLRQLLLIGLLAPLLTGCLLMAGRNEQATITAELGSQNVEFVS SDTNGEAVLQALDIGTLPMLLDVTFNAQVASGELVIEVLSGEQANVAFTVVASAEGSSQRGIVMSNDVGDLQYRVRSTNA RNGIYRISYQPPPTPTPTLTPSPTWTLTPSTTPTVEPTAEVTATP >Mature_205_residues MCSRSSAVIPIRLWWFPKPKPSILIANQNHMPNWSLTQLRQLLLIGLLAPLLTGCLLMAGRNEQATITAELGSQNVEFVS SDTNGEAVLQALDIGTLPMLLDVTFNAQVASGELVIEVLSGEQANVAFTVVASAEGSSQRGIVMSNDVGDLQYRVRSTNA RNGIYRISYQPPPTPTPTLTPSPTWTLTPSTTPTVEPTAEVTATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22013; Mature: 22013
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSRSSAVIPIRLWWFPKPKPSILIANQNHMPNWSLTQLRQLLLIGLLAPLLTGCLLMAG CCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECC RNEQATITAELGSQNVEFVSSDTNGEAVLQALDIGTLPMLLDVTFNAQVASGELVIEVLS CCCCEEEEEECCCCCEEEEECCCCCHHEEEECCCCCCEEEEEEEECCEEECCEEEEEEEC GEQANVAFTVVASAEGSSQRGIVMSNDVGDLQYRVRSTNARNGIYRISYQPPPTPTPTLT CCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCC PSPTWTLTPSTTPTVEPTAEVTATP CCCCEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure MCSRSSAVIPIRLWWFPKPKPSILIANQNHMPNWSLTQLRQLLLIGLLAPLLTGCLLMAG CCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECC RNEQATITAELGSQNVEFVSSDTNGEAVLQALDIGTLPMLLDVTFNAQVASGELVIEVLS CCCCEEEEEECCCCCEEEEECCCCCHHEEEECCCCCCEEEEEEEECCEEECCEEEEEEEC GEQANVAFTVVASAEGSSQRGIVMSNDVGDLQYRVRSTNARNGIYRISYQPPPTPTPTLT CCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCC PSPTWTLTPSTTPTVEPTAEVTATP CCCCEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA