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The map label for this gene is ftsY [H]

Identifier: 159900675

GI number: 159900675

Start: 5309309

End: 5310274

Strand: Direct

Name: ftsY [H]

Synonym: Haur_4162

Alternate gene names: 159900675

Gene position: 5309309-5310274 (Clockwise)

Preceding gene: 159900674

Following gene: 159900676

Centisome position: 83.66

GC content: 50.52

Gene sequence:

>966_bases
ATGTTTCGACGACTCTTCGGTGGTGAAGAACGCTCCGAACAAGAAATTAAACAAGAAGAAAAAAAGATTGAACAAAGTGT
TCAAAAAACCCGTAGTGGCTTTTTTGGCCGCATTACGGCTATGTTTCGTAGCGAAGATCCCATCACCAACGAGCTGTGGG
ATGAGCTAGAGGAATTGTTGATTGCTGGCGATGTTGGGGCCGAAAATGCCCTTAAAATTGTTGAGCGGGTGCGCGAAAAG
TGCGAGAAGAAGGGCTTTAAGTTTGCCAGTGAAGCCCGTTCGTTGCTCAAAAGCGAGCTGGTCAACCGCCTCGATGTGGA
TACGCCGCAATACTCCGAACGCTCAACCAAGCCGTATGTCATTTTGGTAGTAGGAGTCAATGGGGTTGGCAAAACCACCT
TGATCGCCAAATTGGCTAATCGCTACAAAGCCATGGGCAAAAATGTCATCCTCGCTGCCGCCGATACCTTTCGGGCAGCG
GCGATCGATCAATTGCAACACTGGGCCGATCGGGTCGGCGTGCCGATGATTAGCCAACAACCAGGCTCCGATCCAGGCGC
GGTGGCCTACGACGCAACCCAGGCAACCTACAATCAACAAGCCGATGTGCTGATTATCGACACAGCTGGGCGCTTGCAAA
GCAAGCACAACTTGATGAAGGAGCTTGAAAAAATCTCCAATGTAGTCAAGAAGCGCTGGCAATATGCTCCCCACGAGGTG
TTGTTGGTGCTCGATGCAACAACTGGCCAAAATGGCTTGATTCAAGCACGAGCCTTTACCCAAGCCGCCCAAGTGACCCA
CTTGGCCTTGACCAAACTTGATGGCACAGCCAAAGGTGGCATTGCCTTCGCGATTGTCCAAGAAATCGAGCGCCCGATTA
AATATATCGGCACTGGCGAAACGATCAACGATTTAGCCTTGTTCGATGGTGAATCCTTCGTTAATGCGCTCTTCGAGGAG
GAATAA

Upstream 100 bases:

>100_bases
TCCCTCTTCTAGGCTAAGCATGGTATTATTGCCAAAGGATTGGCGGCAGTGCATTGGGCATTGTGCAGCCTCGAATTCAT
GACAAGTTAGGGTGCTTTAT

Downstream 100 bases:

>100_bases
CATGGCAAAATTGCTTTGCCCAGCATGTAAAAAAGCCCTCAAGCTCAGCCCAGTGATGCGGGTTGGGGCGCAAGTTGGCT
GCGTCAACTGCGATAATGTG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MFRRLFGGEERSEQEIKQEEKKIEQSVQKTRSGFFGRITAMFRSEDPITNELWDELEELLIAGDVGAENALKIVERVREK
CEKKGFKFASEARSLLKSELVNRLDVDTPQYSERSTKPYVILVVGVNGVGKTTLIAKLANRYKAMGKNVILAAADTFRAA
AIDQLQHWADRVGVPMISQQPGSDPGAVAYDATQATYNQQADVLIIDTAGRLQSKHNLMKELEKISNVVKKRWQYAPHEV
LLVLDATTGQNGLIQARAFTQAAQVTHLALTKLDGTAKGGIAFAIVQEIERPIKYIGTGETINDLALFDGESFVNALFEE
E

Sequences:

>Translated_321_residues
MFRRLFGGEERSEQEIKQEEKKIEQSVQKTRSGFFGRITAMFRSEDPITNELWDELEELLIAGDVGAENALKIVERVREK
CEKKGFKFASEARSLLKSELVNRLDVDTPQYSERSTKPYVILVVGVNGVGKTTLIAKLANRYKAMGKNVILAAADTFRAA
AIDQLQHWADRVGVPMISQQPGSDPGAVAYDATQATYNQQADVLIIDTAGRLQSKHNLMKELEKISNVVKKRWQYAPHEV
LLVLDATTGQNGLIQARAFTQAAQVTHLALTKLDGTAKGGIAFAIVQEIERPIKYIGTGETINDLALFDGESFVNALFEE
E
>Mature_321_residues
MFRRLFGGEERSEQEIKQEEKKIEQSVQKTRSGFFGRITAMFRSEDPITNELWDELEELLIAGDVGAENALKIVERVREK
CEKKGFKFASEARSLLKSELVNRLDVDTPQYSERSTKPYVILVVGVNGVGKTTLIAKLANRYKAMGKNVILAAADTFRAA
AIDQLQHWADRVGVPMISQQPGSDPGAVAYDATQATYNQQADVLIIDTAGRLQSKHNLMKELEKISNVVKKRWQYAPHEV
LLVLDATTGQNGLIQARAFTQAAQVTHLALTKLDGTAKGGIAFAIVQEIERPIKYIGTGETINDLALFDGESFVNALFEE
E

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=298, Percent_Identity=31.8791946308725, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI226371618, Length=220, Percent_Identity=35.4545454545455, Blast_Score=141, Evalue=6e-34,
Organism=Homo sapiens, GI23308697, Length=332, Percent_Identity=30.421686746988, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI295424842, Length=346, Percent_Identity=29.7687861271676, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.0740740740741, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI1789874, Length=329, Percent_Identity=45.8966565349544, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788963, Length=278, Percent_Identity=32.3741007194245, Blast_Score=130, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=276, Percent_Identity=32.6086956521739, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=329, Percent_Identity=31.306990881459, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=208, Percent_Identity=38.4615384615385, Blast_Score=146, Evalue=4e-36,
Organism=Drosophila melanogaster, GI17647949, Length=273, Percent_Identity=32.967032967033, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24641198, Length=353, Percent_Identity=28.8951841359773, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35673; Mature: 35673

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRLFGGEERSEQEIKQEEKKIEQSVQKTRSGFFGRITAMFRSEDPITNELWDELEELL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IAGDVGAENALKIVERVREKCEKKGFKFASEARSLLKSELVNRLDVDTPQYSERSTKPYV
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
ILVVGVNGVGKTTLIAKLANRYKAMGKNVILAAADTFRAAAIDQLQHWADRVGVPMISQQ
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
PGSDPGAVAYDATQATYNQQADVLIIDTAGRLQSKHNLMKELEKISNVVKKRWQYAPHEV
CCCCCCCEEECCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LLVLDATTGQNGLIQARAFTQAAQVTHLALTKLDGTAKGGIAFAIVQEIERPIKYIGTGE
EEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TINDLALFDGESFVNALFEEE
CHHHHHEECCHHHHHHHHCCC
>Mature Secondary Structure
MFRRLFGGEERSEQEIKQEEKKIEQSVQKTRSGFFGRITAMFRSEDPITNELWDELEELL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IAGDVGAENALKIVERVREKCEKKGFKFASEARSLLKSELVNRLDVDTPQYSERSTKPYV
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
ILVVGVNGVGKTTLIAKLANRYKAMGKNVILAAADTFRAAAIDQLQHWADRVGVPMISQQ
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
PGSDPGAVAYDATQATYNQQADVLIIDTAGRLQSKHNLMKELEKISNVVKKRWQYAPHEV
CCCCCCCEEECCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LLVLDATTGQNGLIQARAFTQAAQVTHLALTKLDGTAKGGIAFAIVQEIERPIKYIGTGE
EEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TINDLALFDGESFVNALFEEE
CHHHHHEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]