Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900047

Identifier: 159900047

GI number: 159900047

Start: 4444383

End: 4445480

Strand: Direct

Name: 159900047

Synonym: Haur_3530

Alternate gene names: NA

Gene position: 4444383-4445480 (Clockwise)

Preceding gene: 159900046

Following gene: 159900048

Centisome position: 70.03

GC content: 45.08

Gene sequence:

>1098_bases
ATGCCCGCAACCATTGTGCAGATCGACTATGCCGTAGTCGATCCGATCATTCAACGTTTCCAAAAACTGCATGATCAGAG
CCAAACGATTCAAGCCAGCCTCTGCCAAACCATGGCCGCGTTACAAGCTGGCCAATGGCAAGGCAACGCCGCCAACGCCT
GTTTTCAAGAATTTGACCATGTAGTTAAGCCAGCTTTTCAGCGCTTGCTCCACGTCTTGCAAGGCAGTGTTGAAACCACC
AAGGCCATTCGGAAGATCATGGCCGATGCCGAGGCTGAAGCCGCCGCGCTGTTTCGCGGCGATGTTGGCGCGATGGCCGT
AGGTGGTAATGGTGCGATGTTGGTTCAAGAGGCTGATGCGAACACCCCAACCCCAACCCCGCCTGAACCACCACTGAAAC
TGCCATTCGTGCAAAAGCTGATCGAATTGGCGCAGCAATTGTTTGCTGAGTGGCAAAAGAATTTTGGCGATAAGGTCAAT
CCTCATCCTGATGGCTCAGTAAGTGAGGCAGAAGCAACCATTATTTTTAACGATATGGCCAATGAGCCAGATATTGCATT
CAAGTATGCTAATGATGGCTGTTATGCACGGGCACATCTTATGACCTATCGGATTCATGAACGGTATGGTATACCGCTAG
AATCGTTAGAGAAAGCGTATATCCAAGCATCAGGAACAGCCCCTGATACCCATCTTACTGTACCAACCGAATATCGTTAT
TCTGATCAAAAGTATGATGATGTAAGCTCATATGATGGGATTGTGGACTGGGGATGGCATGTTGCACCAACAGTCAAGGT
TAGAAATAATGATGGTTCAATTACACCGATGGTTATCGATCCATCTCTTTTCAGTCAGCCTGTTTCATTAGAAACCTGGC
ATTCTAAAATGAACGATAATGATGCGATATTAAATCTTGTACCTTATAATTGGTATACTCCAAGAAAGGGTTTTGAACCT
ATTTCATCTTTGGGGAAACCCCATCCAAACGAGGGTTTAGTAAATTATACCCATACAAAAGAGGAATTAGACATTTCTGC
TGAAGCAACAATGATTAATTATATGAAAAGATGTGAAGATTCAGGTTATTGCAAATAG

Upstream 100 bases:

>100_bases
CCGTTATAATCAACAGCATTGAGTAGAACTGAGGGCGATCCTCTCCAATTTTCCCGCATGTTTGCCAGAGTTCCCCTCCT
CGGTATGAGGTTTTATTAAG

Downstream 100 bases:

>100_bases
AGGTTAATAATGAAAAAATATAAATATTTATTACTAATAATATTATTTTTAATTTCTTGCACGAATAAGGAGAATATTGT
GGATAATAACGAATTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MPATIVQIDYAVVDPIIQRFQKLHDQSQTIQASLCQTMAALQAGQWQGNAANACFQEFDHVVKPAFQRLLHVLQGSVETT
KAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMLVQEADANTPTPTPPEPPLKLPFVQKLIELAQQLFAEWQKNFGDKVN
PHPDGSVSEAEATIIFNDMANEPDIAFKYANDGCYARAHLMTYRIHERYGIPLESLEKAYIQASGTAPDTHLTVPTEYRY
SDQKYDDVSSYDGIVDWGWHVAPTVKVRNNDGSITPMVIDPSLFSQPVSLETWHSKMNDNDAILNLVPYNWYTPRKGFEP
ISSLGKPHPNEGLVNYTHTKEELDISAEATMINYMKRCEDSGYCK

Sequences:

>Translated_365_residues
MPATIVQIDYAVVDPIIQRFQKLHDQSQTIQASLCQTMAALQAGQWQGNAANACFQEFDHVVKPAFQRLLHVLQGSVETT
KAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMLVQEADANTPTPTPPEPPLKLPFVQKLIELAQQLFAEWQKNFGDKVN
PHPDGSVSEAEATIIFNDMANEPDIAFKYANDGCYARAHLMTYRIHERYGIPLESLEKAYIQASGTAPDTHLTVPTEYRY
SDQKYDDVSSYDGIVDWGWHVAPTVKVRNNDGSITPMVIDPSLFSQPVSLETWHSKMNDNDAILNLVPYNWYTPRKGFEP
ISSLGKPHPNEGLVNYTHTKEELDISAEATMINYMKRCEDSGYCK
>Mature_364_residues
PATIVQIDYAVVDPIIQRFQKLHDQSQTIQASLCQTMAALQAGQWQGNAANACFQEFDHVVKPAFQRLLHVLQGSVETTK
AIRKIMADAEAEAAALFRGDVGAMAVGGNGAMLVQEADANTPTPTPPEPPLKLPFVQKLIELAQQLFAEWQKNFGDKVNP
HPDGSVSEAEATIIFNDMANEPDIAFKYANDGCYARAHLMTYRIHERYGIPLESLEKAYIQASGTAPDTHLTVPTEYRYS
DQKYDDVSSYDGIVDWGWHVAPTVKVRNNDGSITPMVIDPSLFSQPVSLETWHSKMNDNDAILNLVPYNWYTPRKGFEPI
SSLGKPHPNEGLVNYTHTKEELDISAEATMINYMKRCEDSGYCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40609; Mature: 40478

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATIVQIDYAVVDPIIQRFQKLHDQSQTIQASLCQTMAALQAGQWQGNAANACFQEFDH
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVKPAFQRLLHVLQGSVETTKAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMLVQEADA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCEEEEEECCC
NTPTPTPPEPPLKLPFVQKLIELAQQLFAEWQKNFGDKVNPHPDGSVSEAEATIIFNDMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
NEPDIAFKYANDGCYARAHLMTYRIHERYGIPLESLEKAYIQASGTAPDTHLTVPTEYRY
CCCCEEEEECCCCCEEHHHHHHEEHHHHCCCCHHHHHHHHHEECCCCCCCEEECCCCCCC
SDQKYDDVSSYDGIVDWGWHVAPTVKVRNNDGSITPMVIDPSLFSQPVSLETWHSKMNDN
CCCCCCCHHHCCCEEECCCEECEEEEEECCCCCEEEEEECHHHHCCCCCHHHHHHHCCCC
DAILNLVPYNWYTPRKGFEPISSLGKPHPNEGLVNYTHTKEELDISAEATMINYMKRCED
CCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCC
SGYCK
CCCCC
>Mature Secondary Structure 
PATIVQIDYAVVDPIIQRFQKLHDQSQTIQASLCQTMAALQAGQWQGNAANACFQEFDH
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVKPAFQRLLHVLQGSVETTKAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMLVQEADA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCEEEEEECCC
NTPTPTPPEPPLKLPFVQKLIELAQQLFAEWQKNFGDKVNPHPDGSVSEAEATIIFNDMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
NEPDIAFKYANDGCYARAHLMTYRIHERYGIPLESLEKAYIQASGTAPDTHLTVPTEYRY
CCCCEEEEECCCCCEEHHHHHHEEHHHHCCCCHHHHHHHHHEECCCCCCCEEECCCCCCC
SDQKYDDVSSYDGIVDWGWHVAPTVKVRNNDGSITPMVIDPSLFSQPVSLETWHSKMNDN
CCCCCCCHHHCCCEEECCCEECEEEEEECCCCCEEEEEECHHHHCCCCCHHHHHHHCCCC
DAILNLVPYNWYTPRKGFEPISSLGKPHPNEGLVNYTHTKEELDISAEATMINYMKRCED
CCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCC
SGYCK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA