Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900048

Identifier: 159900048

GI number: 159900048

Start: 4445490

End: 4446050

Strand: Direct

Name: 159900048

Synonym: Haur_3531

Alternate gene names: NA

Gene position: 4445490-4446050 (Clockwise)

Preceding gene: 159900047

Following gene: 159900050

Centisome position: 70.05

GC content: 35.12

Gene sequence:

>561_bases
ATGAAAAAATATAAATATTTATTACTAATAATATTATTTTTAATTTCTTGCACGAATAAGGAGAATATTGTGGATAATAA
CGAATTAAAAATTTATATCTTTACCAATGAAGATATAAATTCTCAAAAAGCCGCTAACCCACATATTTCTGATACATTGA
ATCTTTTATCAACAATTGATTTAGAACATGCCGCCTATATAATTCATGAATCGGATATCATTGCCTACGATTGGCGTGAA
CAAACTATTAAGATCATAAATTCTTGGCATAATCGACCGCAAGAAACTCCCTTTTTTATGCATGAAGGCAGCAAAGTCAT
CGTGGTGTTTCAACAACAACGAATCATCTTAACCTCCTTACTTTCAGAAGATACGGCCCGATTTATCCCTTCTGACGAGA
CCGCTATGTATTCGAGTTTTCGTCAAAATCATATATTCTATAGTTTTCGCTATGGGTCATTGCTTCAAACAGCACAATCA
TATCCATTTCTCAATCCTGATCCGGCGATTGCCGAAGCCGTCAAGCAGCATTTGCGCCAACTTGGCAAGTTGGTTGAGTA
G

Upstream 100 bases:

>100_bases
TACCCATACAAAAGAGGAATTAGACATTTCTGCTGAAGCAACAATGATTAATTATATGAAAAGATGTGAAGATTCAGGTT
ATTGCAAATAGAGGTTAATA

Downstream 100 bases:

>100_bases
TAAGTGCCCTGACCCATAGCCTACTCCTTACAAGGGTGGGTTTTAAGGTTGGGTGGGATTTACCGCCGACTGGCATGCCC
TCACCCCCTAGCCCCCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE
QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS
YPFLNPDPAIAEAVKQHLRQLGKLVE

Sequences:

>Translated_186_residues
MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE
QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS
YPFLNPDPAIAEAVKQHLRQLGKLVE
>Mature_186_residues
MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE
QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS
YPFLNPDPAIAEAVKQHLRQLGKLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21711; Mature: 21711

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTID
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
LEHAAYIIHESDIIAYDWREQTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSL
CCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHH
LSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQSYPFLNPDPAIAEAVKQHLRQ
HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LGKLVE
HHHHCC
>Mature Secondary Structure
MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTID
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
LEHAAYIIHESDIIAYDWREQTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSL
CCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHH
LSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQSYPFLNPDPAIAEAVKQHLRQ
HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LGKLVE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA