Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900048
Identifier: 159900048
GI number: 159900048
Start: 4445490
End: 4446050
Strand: Direct
Name: 159900048
Synonym: Haur_3531
Alternate gene names: NA
Gene position: 4445490-4446050 (Clockwise)
Preceding gene: 159900047
Following gene: 159900050
Centisome position: 70.05
GC content: 35.12
Gene sequence:
>561_bases ATGAAAAAATATAAATATTTATTACTAATAATATTATTTTTAATTTCTTGCACGAATAAGGAGAATATTGTGGATAATAA CGAATTAAAAATTTATATCTTTACCAATGAAGATATAAATTCTCAAAAAGCCGCTAACCCACATATTTCTGATACATTGA ATCTTTTATCAACAATTGATTTAGAACATGCCGCCTATATAATTCATGAATCGGATATCATTGCCTACGATTGGCGTGAA CAAACTATTAAGATCATAAATTCTTGGCATAATCGACCGCAAGAAACTCCCTTTTTTATGCATGAAGGCAGCAAAGTCAT CGTGGTGTTTCAACAACAACGAATCATCTTAACCTCCTTACTTTCAGAAGATACGGCCCGATTTATCCCTTCTGACGAGA CCGCTATGTATTCGAGTTTTCGTCAAAATCATATATTCTATAGTTTTCGCTATGGGTCATTGCTTCAAACAGCACAATCA TATCCATTTCTCAATCCTGATCCGGCGATTGCCGAAGCCGTCAAGCAGCATTTGCGCCAACTTGGCAAGTTGGTTGAGTA G
Upstream 100 bases:
>100_bases TACCCATACAAAAGAGGAATTAGACATTTCTGCTGAAGCAACAATGATTAATTATATGAAAAGATGTGAAGATTCAGGTT ATTGCAAATAGAGGTTAATA
Downstream 100 bases:
>100_bases TAAGTGCCCTGACCCATAGCCTACTCCTTACAAGGGTGGGTTTTAAGGTTGGGTGGGATTTACCGCCGACTGGCATGCCC TCACCCCCTAGCCCCCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS YPFLNPDPAIAEAVKQHLRQLGKLVE
Sequences:
>Translated_186_residues MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS YPFLNPDPAIAEAVKQHLRQLGKLVE >Mature_186_residues MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTIDLEHAAYIIHESDIIAYDWRE QTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSLLSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQS YPFLNPDPAIAEAVKQHLRQLGKLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21711; Mature: 21711
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTID CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC LEHAAYIIHESDIIAYDWREQTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSL CCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHH LSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQSYPFLNPDPAIAEAVKQHLRQ HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LGKLVE HHHHCC >Mature Secondary Structure MKKYKYLLLIILFLISCTNKENIVDNNELKIYIFTNEDINSQKAANPHISDTLNLLSTID CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC LEHAAYIIHESDIIAYDWREQTIKIINSWHNRPQETPFFMHEGSKVIVVFQQQRIILTSL CCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHH LSEDTARFIPSDETAMYSSFRQNHIFYSFRYGSLLQTAQSYPFLNPDPAIAEAVKQHLRQ HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LGKLVE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA