Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is bglX [H]
Identifier: 159899980
GI number: 159899980
Start: 4359817
End: 4361982
Strand: Direct
Name: bglX [H]
Synonym: Haur_3463
Alternate gene names: 159899980
Gene position: 4359817-4361982 (Clockwise)
Preceding gene: 159899979
Following gene: 159899981
Centisome position: 68.7
GC content: 52.82
Gene sequence:
>2166_bases ATGCAGTATGAGCAACAAATCGAAGCATTGTTGGCCCAAATGACTCTTGCCGAGAAGATTGGCCAAATGCGCCAGCTTCA TGGCACTGGCGAAACCCAGCAGCAACTGGTGCGCGAAGGCAACTTGGGGTCGGTTCTAAATGTGATTGATGCTGATGCCC ACGAGATTCAGCGCATTGCCGTTGAAGAATCACGCTTGGGCATTCCGCTGTTAATTGGCCGCGATGTGATCCACGGTTTT CGCACAATCTTCCCAATTCCACTTGGCCAGGCTGCTTCGTTTAATCCTCAGCTTGTGCGCGAAGCCGCGCGGATTGCCGC CCGCGAAGCCTCGGCCTCTGGGATCAACTGGACATTTGCCCCGATGATCGATATTTCACGCGACCCACGGTGGGGGCGGA TCGCCGAAAGCTGTGGCGAAGATGCCTATCTTTCAAGTTTGATGGGTGTGGCGATGGTCGAAGGCTTTCAAGGCGACGAT TTGACCGCCCCCGATGCGATTGCTGCTTGTGCCAAACATTATGTGGGCTATGGCGCTAGCGAAAATGGCCGCGATTACAA CACTGCTTGGATTCCCGAAGTGCTCTTACGTGATGTTTATTTAGCACCATTCAAAGCTGCCGCCGATGCTGGCGTGGCCA CCATGATGAGCGCCTTCCACGATTTGAATGGTGTGCCAACCTCAGGCAACGAATTTACGCTGCGTCAAATTTTAAAAGGC GAGTGGAATTACGATGGTATGGTGGTCAGCGATTGGGCCTCGGTTGCCGAAATGATCGCCCATGGCTATGCCGCTGATTT GCGCGATGCTGCCTTGAAAGGTGTAACGGCTGGGGTCGATATGGAAATGGCCAGCACCAGCTACGCCGAATATCTGGCTG CGTTGGTTGAAAGTGGCGCACTCAGCCTCGATTTAATTGATGATGCTGTGCGGCGGGTGTTGCGCATCAAGTTCCGTTTG GGTTTGTTCGATCAACCGTATGCTAACGCTGCGGCGGCTGATTCAGTCGTTGCGCCTGATCATTTGGCTTTGGCTCGCCA AATTGCCAAAGAAAGTTGTGTGCTATTGAGCAATCAGCAAACTTTGCCGCTCAACCCACAACAAACGCGGGTGGCAATTG TTGGGCCGCTCGCCAACCATGCCGCCGATCAACTTGGCTGCTGGGTATTCGATGGCAAGCCCGAAGATAGCCAAACTCCA TTACAAGCGATTCGCGAATTGCTTGGTGACGAGCGGGTGCAATTTGCCCAAGGCTTGCCCGAAGCCCGCAGCTTAGATCA AAGTCTATTTGGCGAGGCAGTCGCGGCGGCTCAAACTGCTGATGTGGTTATTGCCTTCCTTGGTGAAGATGCTGGCTTGA GTGGCGAAGCCCATAGCCGCGCATTCATCGATTTACCTGGCGCACAACTGGCCTTAGTCGATGCCTTGGTGGCAACCGGC AAACCAGTGGTTGCGGTTGTGATGGCTGGACGCTCGTTGGTGTTGGGCGAATTGCAGGATAAAGTGCAGGCGATTTTATA TGCTTGGCATCCTGGCACCATGGCTGGCCCAGCGCTCGCCGATTTGCTGTTTGGCTTGGATAACCCTTCAGGCCGCTTGC CAATTAGCTTCCCGCGCACCGTCGGCCAAGTGCCAATTTATTACAATCGCAAAAACACTGGTCGCCCACCAAGCGAAGAT GCACCGAGTATTCCCACGGGCACGCCGCTTGATCCGAGTGGTTTTACCTCAAGCTACCTCGATGTTGATCATCGGCCCTT GTTTGCTTTTGGTTATGGCTTGAGCTACAGCACATTTAGCTATAGCAATTTGCGTTTATCTAGCCAAAAACTGGCGGTTG GCGACACACTTAGCATCACCACTACGGTGACCAACACTGGCAAGTATGCTGGCGCAGAAGTGGTGCAATTGTATATTCGC GATCTGGTTGGCTGTATGACTCGCCCAATCAAAGAACTCAAAGGCTTCCAACGAATTCATTTGGAGCCAGGCCAAAGCCA AACTGTAACATTTGAACTTAGCAGCGCTGACTTGAGTTTCCATAACAACGCCATGCAACGGATCGTCGAGCCAGGCGAAT TTAATCTCTGGGTTGCGCCAAGCAGCATTGGTGGTTTGCAGGCAAGCTTTGAATTAGTAGCCAAGAGCAAAGAACATCGA GCATAA
Upstream 100 bases:
>100_bases AACCGATCCTGCATGCGTGGCAACTGCCATTTCTGGGCTGTCGAATGGCAATTGCCGACTTGACTATGACAGTCATTCGG CTCAATGAGGACAAACGAAT
Downstream 100 bases:
>100_bases AACATAAAACCAGTTTCGATCCACGAAGGACACGAAGAACCACGAAGACTGATTAATCTGCCTTCGTGCTCTTCGTGTCC TTCGTGGTTAAATATGTTCT
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MQYEQQIEALLAQMTLAEKIGQMRQLHGTGETQQQLVREGNLGSVLNVIDADAHEIQRIAVEESRLGIPLLIGRDVIHGF RTIFPIPLGQAASFNPQLVREAARIAAREASASGINWTFAPMIDISRDPRWGRIAESCGEDAYLSSLMGVAMVEGFQGDD LTAPDAIAACAKHYVGYGASENGRDYNTAWIPEVLLRDVYLAPFKAAADAGVATMMSAFHDLNGVPTSGNEFTLRQILKG EWNYDGMVVSDWASVAEMIAHGYAADLRDAALKGVTAGVDMEMASTSYAEYLAALVESGALSLDLIDDAVRRVLRIKFRL GLFDQPYANAAAADSVVAPDHLALARQIAKESCVLLSNQQTLPLNPQQTRVAIVGPLANHAADQLGCWVFDGKPEDSQTP LQAIRELLGDERVQFAQGLPEARSLDQSLFGEAVAAAQTADVVIAFLGEDAGLSGEAHSRAFIDLPGAQLALVDALVATG KPVVAVVMAGRSLVLGELQDKVQAILYAWHPGTMAGPALADLLFGLDNPSGRLPISFPRTVGQVPIYYNRKNTGRPPSED APSIPTGTPLDPSGFTSSYLDVDHRPLFAFGYGLSYSTFSYSNLRLSSQKLAVGDTLSITTTVTNTGKYAGAEVVQLYIR DLVGCMTRPIKELKGFQRIHLEPGQSQTVTFELSSADLSFHNNAMQRIVEPGEFNLWVAPSSIGGLQASFELVAKSKEHR A
Sequences:
>Translated_721_residues MQYEQQIEALLAQMTLAEKIGQMRQLHGTGETQQQLVREGNLGSVLNVIDADAHEIQRIAVEESRLGIPLLIGRDVIHGF RTIFPIPLGQAASFNPQLVREAARIAAREASASGINWTFAPMIDISRDPRWGRIAESCGEDAYLSSLMGVAMVEGFQGDD LTAPDAIAACAKHYVGYGASENGRDYNTAWIPEVLLRDVYLAPFKAAADAGVATMMSAFHDLNGVPTSGNEFTLRQILKG EWNYDGMVVSDWASVAEMIAHGYAADLRDAALKGVTAGVDMEMASTSYAEYLAALVESGALSLDLIDDAVRRVLRIKFRL GLFDQPYANAAAADSVVAPDHLALARQIAKESCVLLSNQQTLPLNPQQTRVAIVGPLANHAADQLGCWVFDGKPEDSQTP LQAIRELLGDERVQFAQGLPEARSLDQSLFGEAVAAAQTADVVIAFLGEDAGLSGEAHSRAFIDLPGAQLALVDALVATG KPVVAVVMAGRSLVLGELQDKVQAILYAWHPGTMAGPALADLLFGLDNPSGRLPISFPRTVGQVPIYYNRKNTGRPPSED APSIPTGTPLDPSGFTSSYLDVDHRPLFAFGYGLSYSTFSYSNLRLSSQKLAVGDTLSITTTVTNTGKYAGAEVVQLYIR DLVGCMTRPIKELKGFQRIHLEPGQSQTVTFELSSADLSFHNNAMQRIVEPGEFNLWVAPSSIGGLQASFELVAKSKEHR A >Mature_721_residues MQYEQQIEALLAQMTLAEKIGQMRQLHGTGETQQQLVREGNLGSVLNVIDADAHEIQRIAVEESRLGIPLLIGRDVIHGF RTIFPIPLGQAASFNPQLVREAARIAAREASASGINWTFAPMIDISRDPRWGRIAESCGEDAYLSSLMGVAMVEGFQGDD LTAPDAIAACAKHYVGYGASENGRDYNTAWIPEVLLRDVYLAPFKAAADAGVATMMSAFHDLNGVPTSGNEFTLRQILKG EWNYDGMVVSDWASVAEMIAHGYAADLRDAALKGVTAGVDMEMASTSYAEYLAALVESGALSLDLIDDAVRRVLRIKFRL GLFDQPYANAAAADSVVAPDHLALARQIAKESCVLLSNQQTLPLNPQQTRVAIVGPLANHAADQLGCWVFDGKPEDSQTP LQAIRELLGDERVQFAQGLPEARSLDQSLFGEAVAAAQTADVVIAFLGEDAGLSGEAHSRAFIDLPGAQLALVDALVATG KPVVAVVMAGRSLVLGELQDKVQAILYAWHPGTMAGPALADLLFGLDNPSGRLPISFPRTVGQVPIYYNRKNTGRPPSED APSIPTGTPLDPSGFTSSYLDVDHRPLFAFGYGLSYSTFSYSNLRLSSQKLAVGDTLSITTTVTNTGKYAGAEVVQLYIR DLVGCMTRPIKELKGFQRIHLEPGQSQTVTFELSSADLSFHNNAMQRIVEPGEFNLWVAPSSIGGLQASFELVAKSKEHR A
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=740, Percent_Identity=40.8108108108108, Blast_Score=567, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 77570; Mature: 77570
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYEQQIEALLAQMTLAEKIGQMRQLHGTGETQQQLVREGNLGSVLNVIDADAHEIQRIA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH VEESRLGIPLLIGRDVIHGFRTIFPIPLGQAASFNPQLVREAARIAAREASASGINWTFA HHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE PMIDISRDPRWGRIAESCGEDAYLSSLMGVAMVEGFQGDDLTAPDAIAACAKHYVGYGAS EEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC ENGRDYNTAWIPEVLLRDVYLAPFKAAADAGVATMMSAFHDLNGVPTSGNEFTLRQILKG CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC EWNYDGMVVSDWASVAEMIAHGYAADLRDAALKGVTAGVDMEMASTSYAEYLAALVESGA CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC LSLDLIDDAVRRVLRIKFRLGLFDQPYANAAAADSVVAPDHLALARQIAKESCVLLSNQQ CEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCC TLPLNPQQTRVAIVGPLANHAADQLGCWVFDGKPEDSQTPLQAIRELLGDERVQFAQGLP CCCCCCCCCEEEEECCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCC EARSLDQSLFGEAVAAAQTADVVIAFLGEDAGLSGEAHSRAFIDLPGAQLALVDALVATG HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCC KPVVAVVMAGRSLVLGELQDKVQAILYAWHPGTMAGPALADLLFGLDNPSGRLPISFPRT CCEEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCHH VGQVPIYYNRKNTGRPPSEDAPSIPTGTPLDPSGFTSSYLDVDHRPLFAFGYGLSYSTFS HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCEEE YSNLRLSSQKLAVGDTLSITTTVTNTGKYAGAEVVQLYIRDLVGCMTRPIKELKGFQRIH CCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LEPGQSQTVTFELSSADLSFHNNAMQRIVEPGEFNLWVAPSSIGGLQASFELVAKSKEHR ECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC A C >Mature Secondary Structure MQYEQQIEALLAQMTLAEKIGQMRQLHGTGETQQQLVREGNLGSVLNVIDADAHEIQRIA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH VEESRLGIPLLIGRDVIHGFRTIFPIPLGQAASFNPQLVREAARIAAREASASGINWTFA HHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE PMIDISRDPRWGRIAESCGEDAYLSSLMGVAMVEGFQGDDLTAPDAIAACAKHYVGYGAS EEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC ENGRDYNTAWIPEVLLRDVYLAPFKAAADAGVATMMSAFHDLNGVPTSGNEFTLRQILKG CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC EWNYDGMVVSDWASVAEMIAHGYAADLRDAALKGVTAGVDMEMASTSYAEYLAALVESGA CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC LSLDLIDDAVRRVLRIKFRLGLFDQPYANAAAADSVVAPDHLALARQIAKESCVLLSNQQ CEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCC TLPLNPQQTRVAIVGPLANHAADQLGCWVFDGKPEDSQTPLQAIRELLGDERVQFAQGLP CCCCCCCCCEEEEECCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCC EARSLDQSLFGEAVAAAQTADVVIAFLGEDAGLSGEAHSRAFIDLPGAQLALVDALVATG HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCC KPVVAVVMAGRSLVLGELQDKVQAILYAWHPGTMAGPALADLLFGLDNPSGRLPISFPRT CCEEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCHH VGQVPIYYNRKNTGRPPSEDAPSIPTGTPLDPSGFTSSYLDVDHRPLFAFGYGLSYSTFS HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCEEE YSNLRLSSQKLAVGDTLSITTTVTNTGKYAGAEVVQLYIRDLVGCMTRPIKELKGFQRIH CCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LEPGQSQTVTFELSSADLSFHNNAMQRIVEPGEFNLWVAPSSIGGLQASFELVAKSKEHR ECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]