Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899981
Identifier: 159899981
GI number: 159899981
Start: 4362138
End: 4362566
Strand: Direct
Name: 159899981
Synonym: Haur_3464
Alternate gene names: NA
Gene position: 4362138-4362566 (Clockwise)
Preceding gene: 159899980
Following gene: 159899982
Centisome position: 68.73
GC content: 48.48
Gene sequence:
>429_bases ATGTCGCTTGCCTTGAATGTACTTAATCAGAGCCAGCCAAGTTGTGCTGGTTGTGGTGGTTTATGTTGCCGCTCGTTTGT ATTGCCAATTGATACTCCCGAAACCCGCGAGGATTTTGATGTGCTGCGCTGGCTGGTGTTGCATCGTGGAGTCAAATGCT TAATCAAACAATCGGTTTGGGAATTAGAAATTGACCTGCCATGTGAACATTTGCAGGAAGATAGCCGCTGTGGAATTTAT ATGCAGCGCCCAAATGTTTGCGTTGAGTATGAAGTAGCAACCTGCGAACGGCATCAGCCACCGCATTTCGAGGCCGTGAT CGATAACGAACATGCTTTGCGGGCTTGGGTTTTCTCGCGCTACGGCATGTATCCCGATGACCCCGATTTTCCCTATGGCG AGCAAACGATTCGCGTTGGTTTGTTTTAA
Upstream 100 bases:
>100_bases ATCTGCCTTCGTGCTCTTCGTGTCCTTCGTGGTTAAATATGTTCTTTTGGATTAAAATAGATCTGTCCAGTGTTTAACTT CATCCACAAGGAACAAAAAT
Downstream 100 bases:
>100_bases GCGCGATCATCGGTATCATGTGCCCAGCGAACGTCTAGTGATAAGGAACGATCAATGTCGATCATTCAGAGTACGCTCGA TATCCATAGCCCTGAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSLALNVLNQSQPSCAGCGGLCCRSFVLPIDTPETREDFDVLRWLVLHRGVKCLIKQSVWELEIDLPCEHLQEDSRCGIY MQRPNVCVEYEVATCERHQPPHFEAVIDNEHALRAWVFSRYGMYPDDPDFPYGEQTIRVGLF
Sequences:
>Translated_142_residues MSLALNVLNQSQPSCAGCGGLCCRSFVLPIDTPETREDFDVLRWLVLHRGVKCLIKQSVWELEIDLPCEHLQEDSRCGIY MQRPNVCVEYEVATCERHQPPHFEAVIDNEHALRAWVFSRYGMYPDDPDFPYGEQTIRVGLF >Mature_141_residues SLALNVLNQSQPSCAGCGGLCCRSFVLPIDTPETREDFDVLRWLVLHRGVKCLIKQSVWELEIDLPCEHLQEDSRCGIYM QRPNVCVEYEVATCERHQPPHFEAVIDNEHALRAWVFSRYGMYPDDPDFPYGEQTIRVGLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16361; Mature: 16230
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALNVLNQSQPSCAGCGGLCCRSFVLPIDTPETREDFDVLRWLVLHRGVKCLIKQSVW CCEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELEIDLPCEHLQEDSRCGIYMQRPNVCVEYEVATCERHQPPHFEAVIDNEHALRAWVFSR EEEECCCHHHCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHH YGMYPDDPDFPYGEQTIRVGLF CCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure SLALNVLNQSQPSCAGCGGLCCRSFVLPIDTPETREDFDVLRWLVLHRGVKCLIKQSVW CEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELEIDLPCEHLQEDSRCGIYMQRPNVCVEYEVATCERHQPPHFEAVIDNEHALRAWVFSR EEEECCCHHHCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHH YGMYPDDPDFPYGEQTIRVGLF CCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA