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The map label for this gene is yesW [H]

Identifier: 159899979

GI number: 159899979

Start: 4356928

End: 4359249

Strand: Direct

Name: yesW [H]

Synonym: Haur_3462

Alternate gene names: 159899979

Gene position: 4356928-4359249 (Clockwise)

Preceding gene: 159899978

Following gene: 159899980

Centisome position: 68.65

GC content: 53.49

Gene sequence:

>2322_bases
ATGAACTATCGCTGGCGAATATGCCTGCTATTAATTGCAACAATACTGAGTACATTTAGTTACACCAATACCAATGCCCA
AAGTGGCCTAAGTTGCCAAGTTAATTATGCGCTTACCAACCAATGGGGCGGCGGGTTTCAAGCCGATGTGGTGGTGCGCA
ACACCGGAACCAGCGCGATCAACGGCTGGACGGTTGCTTGGAGTGCCGCCAGCGGCCAGCAAATTGGCCAAATGTGGAAT
GCAACCTTTACCCAAAGTGGCACGCAAGTTAGTGCCAAAAATGTTGATTGGAATGCCAACATCGCCGCTGGTGGCAGCCA
AAGCTTTGGCTTTACCGCTACCACGACTGGTAGTTTGGCCGTGCCTAGCAGTTTTACGGTCAATGGTGTTGTGTGTGGCG
GTAGCGTTAGCCCTACGGCAACCACTCCAGCAGCAACGGCAACGCGCACGCCAACCAGTGTGCCAACCGCAACCCGTATT
GCGACTAGCATACCAACCGCAACAAATGCGGCAACCAGCGTGCCGACGGCAACGCGTGCACCAACCAGCGTGCCCACGGC
CACCCCAAGCACAACCACAGGCCGCCAAATGGAAAAACTCAATCGCGGGATCATCAGCGTGCGCCAAGGCAGCAATAATT
TTGTGAGCTGGCGCATGTTTGGCACTGATCTTAGCGCGATTGGCTTTAACCTCTATCGTGGCACCACCAAAGTTAATTCC
AGCCCAATTACCAATGCTACCAGTTATTTGGATAGCGGCGCGGCGGCCAATAGCGTTTACACCGTGCGGCCTGTGATCGA
TGGCGTTGAACAAACTGCCTCAGAAAACTCGCTCAATTTTGCCAATGGCTATCTCGATGTGGCCTTGCAAATTCCGGCTG
GTGGCACGACACCTGATGGCGTGGCCTATACCTACACCGCCAACGATGCCAGCGTCGGCGACCTCGATGGCGATGGGCAA
TACGAAATTGTACTGAAATGGGATCCAACCAATTCCAAAGATAATTCGCAATCTGGCTATACTGGCAATGTTTATCTCGA
TGGCTACAAATTGAACGGAACCCGTTTATGGCGCATCGATTTGGGCCGTAATATTCGGGCTGGGGCGCATTACACCCAAT
TTATGGTCTACGATTTGGATGGCGATGGGAAGGCCGAAGTTGCCGCCAAAACTGCCGATGGCACGCGTGATAATTCTGGC
ACCGTGATTGGCAACGCCAGCGCCGATTATCGCAATTCCAGCGGCTACATTCTTTCTGGCCCCGAATATCTGACGGTATT
CAATGGCCAAACGGGCGTGATTCGCTCGACCGTCAATTATGATCCTGCACGGGGCACGGTTTCGTCGTGGGGCGATAGCT
ATGGCAACCGCGTTGATCGCTTTTTGGGTGGAATTGCCTACCTCGATGGTCAACGCCCGAGCCTGATTATGAGCCGTGGC
TACTACACCCGCAGCGTAATTGCCGCTTGGGATTTCCGCAATGGCAGTTTGACCAAGCGTTGGACGTTTGATAGCAATGT
GTCGGGCAGCCAATATGCTGGGCAAGGCAACCATGGCCTTTCGATCGCCGATGTTGATCAAGATGGCAAAGATGAGATTA
TCTTCGGAGCCATGACGATTAATGATAATGGCCAACCACTGTGGAACACTCGCAATGGTCATGGCGATGCGATGCACGTC
GGCGATCTTGACCCAAGTCGGGCTGGCTTGGAAGTGTTCAAAGTCAGCGAGGATTCATCAAAGCCTAGCTCGTGGTTTGC
CGATGCCCGCACAGGCCAAATTTTGTGGCAAACAGCGGCAGGTGGCGATAATGGGCGCGGCGTTTCGGGCGATATTTGGT
CGGGCAGCCCGGGCGCTGAATCGTGGTCATCGATGGATAGCAATTTGCGTAGCGTCAGCGGGGCAACTCTTGGCCGCAAA
CCATCAGCAACCAACTTCTTGATTTGGTGGGATGGCGATCCAATGCGCGAATTGCTTGATGCCACCCGTATCGACAAATA
TGGCACATCAGGCGATACGCGCTTGCTGACTGGCAGCAATGTTAGCTCCAACAACAGCACTAAATCGACCCCAGCGCTCA
GCGGCGATATTTTGGGCGATTGGCGCGAAGAGGTGATTTGGCGCACCAGCGATAACACCGCGCTGCGGATTTATTCAACT
AGCACCAGCACCAACCGCCGCATCTTCACCTTGATGCACGATGCCCAATATCGAGTGGCAATTGCTTGGCAAAACACCGC
CTACAATCAACCACCGCATCCTAGCTTTTTCTTGGGCGATGGCATGAGCAATCCACCGCAACCGAATATCTACTTGCGCT
AA

Upstream 100 bases:

>100_bases
ACACTATCGCCAATGTTCTTCGTATGCTTCACGATTAAGCAATGTCCCGATCCCCTATCCCCAACAACCGATCCCCACGT
TACAAAGGAGCACCAAAACC

Downstream 100 bases:

>100_bases
ATTGATCTAGCCCAAAATCACGCACCAAAGGCCGAGGAAATTCCTCGGCCTTTGATAGTTCCCTCACCCCAACCCCTCTC
CCACTGCGGCGGGCGAGGGG

Product: cellulose-binding family II protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MNYRWRICLLLIATILSTFSYTNTNAQSGLSCQVNYALTNQWGGGFQADVVVRNTGTSAINGWTVAWSAASGQQIGQMWN
ATFTQSGTQVSAKNVDWNANIAAGGSQSFGFTATTTGSLAVPSSFTVNGVVCGGSVSPTATTPAATATRTPTSVPTATRI
ATSIPTATNAATSVPTATRAPTSVPTATPSTTTGRQMEKLNRGIISVRQGSNNFVSWRMFGTDLSAIGFNLYRGTTKVNS
SPITNATSYLDSGAAANSVYTVRPVIDGVEQTASENSLNFANGYLDVALQIPAGGTTPDGVAYTYTANDASVGDLDGDGQ
YEIVLKWDPTNSKDNSQSGYTGNVYLDGYKLNGTRLWRIDLGRNIRAGAHYTQFMVYDLDGDGKAEVAAKTADGTRDNSG
TVIGNASADYRNSSGYILSGPEYLTVFNGQTGVIRSTVNYDPARGTVSSWGDSYGNRVDRFLGGIAYLDGQRPSLIMSRG
YYTRSVIAAWDFRNGSLTKRWTFDSNVSGSQYAGQGNHGLSIADVDQDGKDEIIFGAMTINDNGQPLWNTRNGHGDAMHV
GDLDPSRAGLEVFKVSEDSSKPSSWFADARTGQILWQTAAGGDNGRGVSGDIWSGSPGAESWSSMDSNLRSVSGATLGRK
PSATNFLIWWDGDPMRELLDATRIDKYGTSGDTRLLTGSNVSSNNSTKSTPALSGDILGDWREEVIWRTSDNTALRIYST
STSTNRRIFTLMHDAQYRVAIAWQNTAYNQPPHPSFFLGDGMSNPPQPNIYLR

Sequences:

>Translated_773_residues
MNYRWRICLLLIATILSTFSYTNTNAQSGLSCQVNYALTNQWGGGFQADVVVRNTGTSAINGWTVAWSAASGQQIGQMWN
ATFTQSGTQVSAKNVDWNANIAAGGSQSFGFTATTTGSLAVPSSFTVNGVVCGGSVSPTATTPAATATRTPTSVPTATRI
ATSIPTATNAATSVPTATRAPTSVPTATPSTTTGRQMEKLNRGIISVRQGSNNFVSWRMFGTDLSAIGFNLYRGTTKVNS
SPITNATSYLDSGAAANSVYTVRPVIDGVEQTASENSLNFANGYLDVALQIPAGGTTPDGVAYTYTANDASVGDLDGDGQ
YEIVLKWDPTNSKDNSQSGYTGNVYLDGYKLNGTRLWRIDLGRNIRAGAHYTQFMVYDLDGDGKAEVAAKTADGTRDNSG
TVIGNASADYRNSSGYILSGPEYLTVFNGQTGVIRSTVNYDPARGTVSSWGDSYGNRVDRFLGGIAYLDGQRPSLIMSRG
YYTRSVIAAWDFRNGSLTKRWTFDSNVSGSQYAGQGNHGLSIADVDQDGKDEIIFGAMTINDNGQPLWNTRNGHGDAMHV
GDLDPSRAGLEVFKVSEDSSKPSSWFADARTGQILWQTAAGGDNGRGVSGDIWSGSPGAESWSSMDSNLRSVSGATLGRK
PSATNFLIWWDGDPMRELLDATRIDKYGTSGDTRLLTGSNVSSNNSTKSTPALSGDILGDWREEVIWRTSDNTALRIYST
STSTNRRIFTLMHDAQYRVAIAWQNTAYNQPPHPSFFLGDGMSNPPQPNIYLR
>Mature_773_residues
MNYRWRICLLLIATILSTFSYTNTNAQSGLSCQVNYALTNQWGGGFQADVVVRNTGTSAINGWTVAWSAASGQQIGQMWN
ATFTQSGTQVSAKNVDWNANIAAGGSQSFGFTATTTGSLAVPSSFTVNGVVCGGSVSPTATTPAATATRTPTSVPTATRI
ATSIPTATNAATSVPTATRAPTSVPTATPSTTTGRQMEKLNRGIISVRQGSNNFVSWRMFGTDLSAIGFNLYRGTTKVNS
SPITNATSYLDSGAAANSVYTVRPVIDGVEQTASENSLNFANGYLDVALQIPAGGTTPDGVAYTYTANDASVGDLDGDGQ
YEIVLKWDPTNSKDNSQSGYTGNVYLDGYKLNGTRLWRIDLGRNIRAGAHYTQFMVYDLDGDGKAEVAAKTADGTRDNSG
TVIGNASADYRNSSGYILSGPEYLTVFNGQTGVIRSTVNYDPARGTVSSWGDSYGNRVDRFLGGIAYLDGQRPSLIMSRG
YYTRSVIAAWDFRNGSLTKRWTFDSNVSGSQYAGQGNHGLSIADVDQDGKDEIIFGAMTINDNGQPLWNTRNGHGDAMHV
GDLDPSRAGLEVFKVSEDSSKPSSWFADARTGQILWQTAAGGDNGRGVSGDIWSGSPGAESWSSMDSNLRSVSGATLGRK
PSATNFLIWWDGDPMRELLDATRIDKYGTSGDTRLLTGSNVSSNNSTKSTPALSGDILGDWREEVIWRTSDNTALRIYST
STSTNRRIFTLMHDAQYRVAIAWQNTAYNQPPHPSFFLGDGMSNPPQPNIYLR

Specific function: Pectinolytic enzyme that degrades type I rhamnogalacturonan from plant cell walls and releases oligosaccharide products. Degrades rhamnogalacturonan, polygalacturonic acid, pectic acid and pectin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide lyase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82631; Mature: 82631

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00561 CBD_BACTERIAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRWRICLLLIATILSTFSYTNTNAQSGLSCQVNYALTNQWGGGFQADVVVRNTGTSAI
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCC
NGWTVAWSAASGQQIGQMWNATFTQSGTQVSAKNVDWNANIAAGGSQSFGFTATTTGSLA
CCEEEEEECCCCHHHHHHHCCEEECCCCEEEECCCCCCCEEECCCCCCCCEEEECCCCEE
VPSSFTVNGVVCGGSVSPTATTPAATATRTPTSVPTATRIATSIPTATNAATSVPTATRA
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PTSVPTATPSTTTGRQMEKLNRGIISVRQGSNNFVSWRMFGTDLSAIGFNLYRGTTKVNS
CCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEEECCCHHHHCEEEEECCEECCC
SPITNATSYLDSGAAANSVYTVRPVIDGVEQTASENSLNFANGYLDVALQIPAGGTTPDG
CCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCCCC
VAYTYTANDASVGDLDGDGQYEIVLKWDPTNSKDNSQSGYTGNVYLDGYKLNGTRLWRID
EEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEE
LGRNIRAGAHYTQFMVYDLDGDGKAEVAAKTADGTRDNSGTVIGNASADYRNSSGYILSG
CCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEC
PEYLTVFNGQTGVIRSTVNYDPARGTVSSWGDSYGNRVDRFLGGIAYLDGQRPSLIMSRG
CCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECC
YYTRSVIAAWDFRNGSLTKRWTFDSNVSGSQYAGQGNHGLSIADVDQDGKDEIIFGAMTI
CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEE
NDNGQPLWNTRNGHGDAMHVGDLDPSRAGLEVFKVSEDSSKPSSWFADARTGQILWQTAA
CCCCCEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCEEEEEEEC
GGDNGRGVSGDIWSGSPGAESWSSMDSNLRSVSGATLGRKPSATNFLIWWDGDPMRELLD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
ATRIDKYGTSGDTRLLTGSNVSSNNSTKSTPALSGDILGDWREEVIWRTSDNTALRIYST
HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEEEEEC
STSTNRRIFTLMHDAQYRVAIAWQNTAYNQPPHPSFFLGDGMSNPPQPNIYLR
CCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEC
>Mature Secondary Structure
MNYRWRICLLLIATILSTFSYTNTNAQSGLSCQVNYALTNQWGGGFQADVVVRNTGTSAI
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCC
NGWTVAWSAASGQQIGQMWNATFTQSGTQVSAKNVDWNANIAAGGSQSFGFTATTTGSLA
CCEEEEEECCCCHHHHHHHCCEEECCCCEEEECCCCCCCEEECCCCCCCCEEEECCCCEE
VPSSFTVNGVVCGGSVSPTATTPAATATRTPTSVPTATRIATSIPTATNAATSVPTATRA
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PTSVPTATPSTTTGRQMEKLNRGIISVRQGSNNFVSWRMFGTDLSAIGFNLYRGTTKVNS
CCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEEECCCHHHHCEEEEECCEECCC
SPITNATSYLDSGAAANSVYTVRPVIDGVEQTASENSLNFANGYLDVALQIPAGGTTPDG
CCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCCCC
VAYTYTANDASVGDLDGDGQYEIVLKWDPTNSKDNSQSGYTGNVYLDGYKLNGTRLWRID
EEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEE
LGRNIRAGAHYTQFMVYDLDGDGKAEVAAKTADGTRDNSGTVIGNASADYRNSSGYILSG
CCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEC
PEYLTVFNGQTGVIRSTVNYDPARGTVSSWGDSYGNRVDRFLGGIAYLDGQRPSLIMSRG
CCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECC
YYTRSVIAAWDFRNGSLTKRWTFDSNVSGSQYAGQGNHGLSIADVDQDGKDEIIFGAMTI
CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEE
NDNGQPLWNTRNGHGDAMHVGDLDPSRAGLEVFKVSEDSSKPSSWFADARTGQILWQTAA
CCCCCEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCEEEEEEEC
GGDNGRGVSGDIWSGSPGAESWSSMDSNLRSVSGATLGRKPSATNFLIWWDGDPMRELLD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
ATRIDKYGTSGDTRLLTGSNVSSNNSTKSTPALSGDILGDWREEVIWRTSDNTALRIYST
HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEEEEEC
STSTNRRIFTLMHDAQYRVAIAWQNTAYNQPPHPSFFLGDGMSNPPQPNIYLR
CCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]