Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is idnK [H]
Identifier: 159899953
GI number: 159899953
Start: 4325046
End: 4325546
Strand: Direct
Name: idnK [H]
Synonym: Haur_3436
Alternate gene names: 159899953
Gene position: 4325046-4325546 (Clockwise)
Preceding gene: 159899952
Following gene: 159899954
Centisome position: 68.15
GC content: 49.3
Gene sequence:
>501_bases ATGGTGATTGTGGTTATGGGCGTGAGTGGAGTGGGCAAAACCACGGTTGGCCAATTATTGGCAACGGCTCAAGCTTGGCA ATTTATCGATGCTGACGATTTACATCCTGAGGCCAATCGCCAAAAAATGGCGAACGGCCAGCCATTAACCGATGCTGATC GCTGGCCGTGGCTAGCCTTAGTGCGCGAACAGATTAGCGCCGTCTTGGCCCAAAATTGTAGTTTAGTCTTGGCATGCTCG GCCTTACGGGCTGAATATCGCGATTATTTAGCAGTCGATCAACAGGTGCATTTTGTGCATTTGGTCGGCGATCCTGCATT AATTCAAGCGCGTTTGCAACAGCGCAGCAATCATTTTATGCCGAGCAGCCTGTTAGCAAGCCAATTAGCCACCTTGGAAA TGCCCAGTAATGCCCTAACCTTGACGGTCGATGCTGAACCTAAAACGCTGGTTGAGAGTATTCAAAGATGGATGCTCGAT TTAACAACTCCTACCAGCTAG
Upstream 100 bases:
>100_bases GGTTCAACGCCATAGCCTCCAGTTCTAAAGCTCTCACAGATTCGCATTCGAGGGAGTTGGCAACCACCAACTTCCTCTTT TTGATTTAAACGGAGTTGCT
Downstream 100 bases:
>100_bases AGGTGGTTATGGATTTTCCAGTGATTTCTGATGCGCAAATTCAGGCGATGGCTGGCGAACGCAGTTTTGAACGCGGCTTA GAATACTTTGAGAGTGGCAT
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MVIVVMGVSGVGKTTVGQLLATAQAWQFIDADDLHPEANRQKMANGQPLTDADRWPWLALVREQISAVLAQNCSLVLACS ALRAEYRDYLAVDQQVHFVHLVGDPALIQARLQQRSNHFMPSSLLASQLATLEMPSNALTLTVDAEPKTLVESIQRWMLD LTTPTS
Sequences:
>Translated_166_residues MVIVVMGVSGVGKTTVGQLLATAQAWQFIDADDLHPEANRQKMANGQPLTDADRWPWLALVREQISAVLAQNCSLVLACS ALRAEYRDYLAVDQQVHFVHLVGDPALIQARLQQRSNHFMPSSLLASQLATLEMPSNALTLTVDAEPKTLVESIQRWMLD LTTPTS >Mature_166_residues MVIVVMGVSGVGKTTVGQLLATAQAWQFIDADDLHPEANRQKMANGQPLTDADRWPWLALVREQISAVLAQNCSLVLACS ALRAEYRDYLAVDQQVHFVHLVGDPALIQARLQQRSNHFMPSSLLASQLATLEMPSNALTLTVDAEPKTLVESIQRWMLD LTTPTS
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=174, Percent_Identity=41.9540229885057, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI1790719, Length=134, Percent_Identity=44.7761194029851, Blast_Score=122, Evalue=9e-30, Organism=Escherichia coli, GI87082265, Length=136, Percent_Identity=39.7058823529412, Blast_Score=108, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25146487, Length=156, Percent_Identity=41.025641025641, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6320454, Length=145, Percent_Identity=37.9310344827586, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18263; Mature: 18263
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIVVMGVSGVGKTTVGQLLATAQAWQFIDADDLHPEANRQKMANGQPLTDADRWPWLAL CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHH VREQISAVLAQNCSLVLACSALRAEYRDYLAVDQQVHFVHLVGDPALIQARLQQRSNHFM HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC PSSLLASQLATLEMPSNALTLTVDAEPKTLVESIQRWMLDLTTPTS CHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVIVVMGVSGVGKTTVGQLLATAQAWQFIDADDLHPEANRQKMANGQPLTDADRWPWLAL CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHH VREQISAVLAQNCSLVLACSALRAEYRDYLAVDQQVHFVHLVGDPALIQARLQQRSNHFM HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC PSSLLASQLATLEMPSNALTLTVDAEPKTLVESIQRWMLDLTTPTS CHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]