Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899952
Identifier: 159899952
GI number: 159899952
Start: 4324044
End: 4324973
Strand: Direct
Name: 159899952
Synonym: Haur_3435
Alternate gene names: NA
Gene position: 4324044-4324973 (Clockwise)
Preceding gene: 159899951
Following gene: 159899953
Centisome position: 68.13
GC content: 53.12
Gene sequence:
>930_bases ATGAACCGCAATCCACGAGCCTTGTTATTTGGCTGGGTTATTCTAGCCTTAATTATTATTGCCTCACCTTCTTTAGTCTT TGCTCAAGCTCTGCGAACCGATGGCGAGGCCTTGGTGGTTCGGGCCGGCTCAACCGAAAGTGGCGACGTTGCGACCATCA GCCAGCCTATCGTGATCGATGGGGTAGTTGAAGGCGATGTCACTTCAGTCACCGGCTCCATTATTGTGCGTGGCTCAGTC GAAGGCGATGTGGTCAGTTTGTTTGGCAATGTGACCTTCGAGGCCGATTCCGTTGCTCAAGGCAATGTGATGGCAGCCAC AGGCGAAGTTCAGTTGCAACAAGGTGCTGATGTAGCCCAAGCTGGGGCTATTTTCAATGGTAATGTCAGCGATAGCGGGG CAACTGCGCTCTTGCCAGTTGAAGGCAATCAAACCCTAACTACCGCAACCCGCGTGATTCTAGCCGTAGTCTTGGCGATT TTGGCCACGATTATTGCCACCTTGCTCAGCTTGATCTGGCCACGCTCGGTTGCTAGCGGTGCTCAAATTATTCGCCTAGC CAGCCAACGTGCTTTGGGCTTGGGCTTGATGTGGTCAGTACTCTCGGTGGCGGTTGTTGGGATTGTCGCGCTGCTCTTGA TCTTCTCGCTGATTGGCTTGGCAGTTTTGCCGGTGCTCTTACTGATTGCCCAAGTGCCCTACTTGATTGGCTTGGCCGCA ATTGCCATGGTGATTGGTCAACGACTCAATTTGCAAGGGCCAGCCGCTGTTTTGGTAGGCAGCTTGGTCGTAGTCTTGCC ATCCGTTGGTTTGGCAGCAATCAGCTTACCAGCAGCCTTTATCTGGTTTTATCTTAGCGCTGGGGTTGGTATCGGCGGGA TGTTCCTGCTTCGCGCCACTGTGGTTCAACGCCATAGCCTCCAGTTCTAA
Upstream 100 bases:
>100_bases TTCCCTTGCTGCTTGGTGTTCTTGTGCTTGCAGGTGCAGCACTGATGATCTGGCGACGTTTGTTGACCCCTTCACCGGCG CTGCTTGTGGAGGTAGAACG
Downstream 100 bases:
>100_bases AGCTCTCACAGATTCGCATTCGAGGGAGTTGGCAACCACCAACTTCCTCTTTTTGATTTAAACGGAGTTGCTATGGTGAT TGTGGTTATGGGCGTGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNRNPRALLFGWVILALIIIASPSLVFAQALRTDGEALVVRAGSTESGDVATISQPIVIDGVVEGDVTSVTGSIIVRGSV EGDVVSLFGNVTFEADSVAQGNVMAATGEVQLQQGADVAQAGAIFNGNVSDSGATALLPVEGNQTLTTATRVILAVVLAI LATIIATLLSLIWPRSVASGAQIIRLASQRALGLGLMWSVLSVAVVGIVALLLIFSLIGLAVLPVLLLIAQVPYLIGLAA IAMVIGQRLNLQGPAAVLVGSLVVVLPSVGLAAISLPAAFIWFYLSAGVGIGGMFLLRATVVQRHSLQF
Sequences:
>Translated_309_residues MNRNPRALLFGWVILALIIIASPSLVFAQALRTDGEALVVRAGSTESGDVATISQPIVIDGVVEGDVTSVTGSIIVRGSV EGDVVSLFGNVTFEADSVAQGNVMAATGEVQLQQGADVAQAGAIFNGNVSDSGATALLPVEGNQTLTTATRVILAVVLAI LATIIATLLSLIWPRSVASGAQIIRLASQRALGLGLMWSVLSVAVVGIVALLLIFSLIGLAVLPVLLLIAQVPYLIGLAA IAMVIGQRLNLQGPAAVLVGSLVVVLPSVGLAAISLPAAFIWFYLSAGVGIGGMFLLRATVVQRHSLQF >Mature_309_residues MNRNPRALLFGWVILALIIIASPSLVFAQALRTDGEALVVRAGSTESGDVATISQPIVIDGVVEGDVTSVTGSIIVRGSV EGDVVSLFGNVTFEADSVAQGNVMAATGEVQLQQGADVAQAGAIFNGNVSDSGATALLPVEGNQTLTTATRVILAVVLAI LATIIATLLSLIWPRSVASGAQIIRLASQRALGLGLMWSVLSVAVVGIVALLLIFSLIGLAVLPVLLLIAQVPYLIGLAA IAMVIGQRLNLQGPAAVLVGSLVVVLPSVGLAAISLPAAFIWFYLSAGVGIGGMFLLRATVVQRHSLQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31630; Mature: 31630
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNPRALLFGWVILALIIIASPSLVFAQALRTDGEALVVRAGSTESGDVATISQPIVID CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCEEEE GVVEGDVTSVTGSIIVRGSVEGDVVSLFGNVTFEADSVAQGNVMAATGEVQLQQGADVAQ EEECCCHHEECCEEEEEECCCCHHHHHHCCCEECCCCCCCCCEEEECCCEEECCCCCHHH AGAIFNGNVSDSGATALLPVEGNQTLTTATRVILAVVLAILATIIATLLSLIWPRSVASG HCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCH AQIIRLASQRALGLGLMWSVLSVAVVGIVALLLIFSLIGLAVLPVLLLIAQVPYLIGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMVIGQRLNLQGPAAVLVGSLVVVLPSVGLAAISLPAAFIWFYLSAGVGIGGMFLLRAT HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VVQRHSLQF HHHHHCCCC >Mature Secondary Structure MNRNPRALLFGWVILALIIIASPSLVFAQALRTDGEALVVRAGSTESGDVATISQPIVID CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCEEEE GVVEGDVTSVTGSIIVRGSVEGDVVSLFGNVTFEADSVAQGNVMAATGEVQLQQGADVAQ EEECCCHHEECCEEEEEECCCCHHHHHHCCCEECCCCCCCCCEEEECCCEEECCCCCHHH AGAIFNGNVSDSGATALLPVEGNQTLTTATRVILAVVLAILATIIATLLSLIWPRSVASG HCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCH AQIIRLASQRALGLGLMWSVLSVAVVGIVALLLIFSLIGLAVLPVLLLIAQVPYLIGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMVIGQRLNLQGPAAVLVGSLVVVLPSVGLAAISLPAAFIWFYLSAGVGIGGMFLLRAT HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VVQRHSLQF HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA