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The map label for this gene is 159899954

Identifier: 159899954

GI number: 159899954

Start: 4325555

End: 4325983

Strand: Direct

Name: 159899954

Synonym: Haur_3437

Alternate gene names: NA

Gene position: 4325555-4325983 (Clockwise)

Preceding gene: 159899953

Following gene: 159899957

Centisome position: 68.16

GC content: 50.12

Gene sequence:

>429_bases
ATGGATTTTCCAGTGATTTCTGATGCGCAAATTCAGGCGATGGCTGGCGAACGCAGTTTTGAACGCGGCTTAGAATACTT
TGAGAGTGGCATGGTTGAATCAGTGCTGCAACGCGGCAATATGATTCAGGCCGTGGTGTGTGGCAGCGAAGATTATCTCT
ATGATGTTGCAGTGCACACCAAAAATGCTGAACAGATTTCAACCCAATGCACCTGCCCCTATGATTATGGCCCGATCTGC
AAACATAGCGTTGCGGTGCTGCTGTTTCTGCTGTATTGCCCCGAACAAGTTGTGCAGCGCCCGCCAATTCGGGCGACCCT
CGATGAACTAGATGATAGCCAAATTCGCAGCTTGTTGCTTGATGTAGCCGAGCAACACCCCGAAATTACGACCTTGGTCG
AACAACACATCGAGCGGTTGGGGTTTTAG

Upstream 100 bases:

>100_bases
ATGCCCTAACCTTGACGGTCGATGCTGAACCTAAAACGCTGGTTGAGAGTATTCAAAGATGGATGCTCGATTTAACAACT
CCTACCAGCTAGAGGTGGTT

Downstream 100 bases:

>100_bases
GCAGGGAATCGGTTGTTATGGGAATAGAAAGCAGCATTTAACGCAGAGGCGCAGAGCGATGTTGGTTGGCTATAGGCTAA
AGGCTTTTGGCTATCGGAAC

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein; SWIM Zinc Finger Domain-Containing Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHTKNAEQISTQCTCPYDYGPIC
KHSVAVLLFLLYCPEQVVQRPPIRATLDELDDSQIRSLLLDVAEQHPEITTLVEQHIERLGF

Sequences:

>Translated_142_residues
MDFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHTKNAEQISTQCTCPYDYGPIC
KHSVAVLLFLLYCPEQVVQRPPIRATLDELDDSQIRSLLLDVAEQHPEITTLVEQHIERLGF
>Mature_142_residues
MDFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHTKNAEQISTQCTCPYDYGPIC
KHSVAVLLFLLYCPEQVVQRPPIRATLDELDDSQIRSLLLDVAEQHPEITTLVEQHIERLGF

Specific function: Unknown

COG id: COG4715

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16024; Mature: 16024

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEC
KNAEQISTQCTCPYDYGPICKHSVAVLLFLLYCPEQVVQRPPIRATLDELDDSQIRSLLL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHCCHHHHHHHHH
DVAEQHPEITTLVEQHIERLGF
HHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEC
KNAEQISTQCTCPYDYGPICKHSVAVLLFLLYCPEQVVQRPPIRATLDELDDSQIRSLLL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHCCHHHHHHHHH
DVAEQHPEITTLVEQHIERLGF
HHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA