Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899951
Identifier: 159899951
GI number: 159899951
Start: 4323511
End: 4324047
Strand: Direct
Name: 159899951
Synonym: Haur_3434
Alternate gene names: NA
Gene position: 4323511-4324047 (Clockwise)
Preceding gene: 159899950
Following gene: 159899952
Centisome position: 68.12
GC content: 56.8
Gene sequence:
>537_bases ATGACATGCCGTTCAATTCGCGAGCTACGTGCTCAGCAACCAGATGACCCTGACGATCAACAAACCATTTCTCGCCATGT ACAGGAGTGCCCAATGTGCCTCGATGAACTTGGGCAATTGCCCGCCGCCTTAGCCGCTCCCAAATCGGCTATTCCACCGC CGAATTTTGCCGCCAGCCTAATGGCAAAATTACCTGCGACTCCTGCGCTTGCCGCAACTCAAGCCCGTAGCCGTGCCTTA CGTCAACGTGTGCTGTGGGGTGTGGTTCTGGGCTTCGTCACATTAATCGTCTTGTGGGGCGGTTATGGGGTCTTGTTTGA TAGCTCGTTGCCTGCCACAACCTTTGGCGGGGTCGATTCGACCGCTGGCCGCGGGGTTTTGGCCTTGACTCTGGCGGGTA AGCCCATGGCGGCAACGCTTGGCTTGGTTGGCATTCCCTTGCTGCTTGGTGTTCTTGTGCTTGCAGGTGCAGCACTGATG ATCTGGCGACGTTTGTTGACCCCTTCACCGGCGCTGCTTGTGGAGGTAGAACGATGA
Upstream 100 bases:
>100_bases TCGAAAATATTACGGGGCTATCAGAAAGTGCGGTTAAAACTCGGCTGCATCGTGCTCGCAACATGGTGGCTGCCGCGTTG GATAAACAAGGAGCAGAGCT
Downstream 100 bases:
>100_bases ACCGCAATCCACGAGCCTTGTTATTTGGCTGGGTTATTCTAGCCTTAATTATTATTGCCTCACCTTCTTTAGTCTTTGCT CAAGCTCTGCGAACCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTCRSIRELRAQQPDDPDDQQTISRHVQECPMCLDELGQLPAALAAPKSAIPPPNFAASLMAKLPATPALAATQARSRAL RQRVLWGVVLGFVTLIVLWGGYGVLFDSSLPATTFGGVDSTAGRGVLALTLAGKPMAATLGLVGIPLLLGVLVLAGAALM IWRRLLTPSPALLVEVER
Sequences:
>Translated_178_residues MTCRSIRELRAQQPDDPDDQQTISRHVQECPMCLDELGQLPAALAAPKSAIPPPNFAASLMAKLPATPALAATQARSRAL RQRVLWGVVLGFVTLIVLWGGYGVLFDSSLPATTFGGVDSTAGRGVLALTLAGKPMAATLGLVGIPLLLGVLVLAGAALM IWRRLLTPSPALLVEVER >Mature_177_residues TCRSIRELRAQQPDDPDDQQTISRHVQECPMCLDELGQLPAALAAPKSAIPPPNFAASLMAKLPATPALAATQARSRALR QRVLWGVVLGFVTLIVLWGGYGVLFDSSLPATTFGGVDSTAGRGVLALTLAGKPMAATLGLVGIPLLLGVLVLAGAALMI WRRLLTPSPALLVEVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18727; Mature: 18596
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRSIRELRAQQPDDPDDQQTISRHVQECPMCLDELGQLPAALAAPKSAIPPPNFAASL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHH MAKLPATPALAATQARSRALRQRVLWGVVLGFVTLIVLWGGYGVLFDSSLPATTFGGVDS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCC TAGRGVLALTLAGKPMAATLGLVGIPLLLGVLVLAGAALMIWRRLLTPSPALLVEVER CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure TCRSIRELRAQQPDDPDDQQTISRHVQECPMCLDELGQLPAALAAPKSAIPPPNFAASL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHH MAKLPATPALAATQARSRALRQRVLWGVVLGFVTLIVLWGGYGVLFDSSLPATTFGGVDS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCC TAGRGVLALTLAGKPMAATLGLVGIPLLLGVLVLAGAALMIWRRLLTPSPALLVEVER CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA