Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899845
Identifier: 159899845
GI number: 159899845
Start: 4197058
End: 4197540
Strand: Direct
Name: 159899845
Synonym: Haur_3328
Alternate gene names: NA
Gene position: 4197058-4197540 (Clockwise)
Preceding gene: 159899844
Following gene: 159899847
Centisome position: 66.13
GC content: 50.72
Gene sequence:
>483_bases ATGGAATCAATTGTGCATATTGTTCTAGCCCTGTTGCGGCGTGAAAATCAGGTGTTATTGGTGCGTCAACAAGGCCAAAA TGGCAGTTATTGGGGTATTCCTGGCGGCAAAGTTGAGCTTGGCGAGCATTGGCTTGAAGCCTTTGCCCGTGAGGTGCGCG AGGAAACTGGCTTGGTGGCTGCTGCTAATACCCTTGCTTACATGTCGCAAGTTTATTTGGTCGGCAAAGAGCAAACTGTG GTTTTTTGCGCCTTCGAAGGCACAACCGAGGGCGAAATCGCAATCAACGACCCCGATAATGAGATTGAAGAGTGTGCGTG GTTTGATCTCCACGAAATTCCTAAAATGATTCAATCGCTGCGCTGGCCGAGCACGCGTCTGCCCTTGCTCGATTATTTGG CAGGCAATGTCGAGGCCGGGCGGGTTTGGGCTTTCCGCTCCAACGAGGATAATAGCGAACAATATCTGCTGCAAGCAATC TGA
Upstream 100 bases:
>100_bases GTGTTACTGCCCGCTTATTTCGCGCCACTATTTTGTTACGCGGCAGTAAATTTTCGTTACGCGGGTTATGGCAGGCGTTG CGCTAGCCCACGGAGGCAGT
Downstream 100 bases:
>100_bases TAACCGTTGCTCACATCCCCAACCCTTCTTACTTACAAAGGTAGGTTTTGAACAACCATAGGGGATTCATTGTTGATTGC ATGCCCTCACCCCCTAGCCC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT-Like Protein; Phosphohydrolase; Nudix Hydrolase
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MESIVHIVLALLRRENQVLLVRQQGQNGSYWGIPGGKVELGEHWLEAFAREVREETGLVAAANTLAYMSQVYLVGKEQTV VFCAFEGTTEGEIAINDPDNEIEECAWFDLHEIPKMIQSLRWPSTRLPLLDYLAGNVEAGRVWAFRSNEDNSEQYLLQAI
Sequences:
>Translated_160_residues MESIVHIVLALLRRENQVLLVRQQGQNGSYWGIPGGKVELGEHWLEAFAREVREETGLVAAANTLAYMSQVYLVGKEQTV VFCAFEGTTEGEIAINDPDNEIEECAWFDLHEIPKMIQSLRWPSTRLPLLDYLAGNVEAGRVWAFRSNEDNSEQYLLQAI >Mature_160_residues MESIVHIVLALLRRENQVLLVRQQGQNGSYWGIPGGKVELGEHWLEAFAREVREETGLVAAANTLAYMSQVYLVGKEQTV VFCAFEGTTEGEIAINDPDNEIEECAWFDLHEIPKMIQSLRWPSTRLPLLDYLAGNVEAGRVWAFRSNEDNSEQYLLQAI
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18123; Mature: 18123
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIVHIVLALLRRENQVLLVRQQGQNGSYWGIPGGKVELGEHWLEAFAREVREETGLVA CHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCEEH AANTLAYMSQVYLVGKEQTVVFCAFEGTTEGEIAINDPDNEIEECAWFDLHEIPKMIQSL HHHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHH RWPSTRLPLLDYLAGNVEAGRVWAFRSNEDNSEQYLLQAI CCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHEEEECC >Mature Secondary Structure MESIVHIVLALLRRENQVLLVRQQGQNGSYWGIPGGKVELGEHWLEAFAREVREETGLVA CHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCEEH AANTLAYMSQVYLVGKEQTVVFCAFEGTTEGEIAINDPDNEIEECAWFDLHEIPKMIQSL HHHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHH RWPSTRLPLLDYLAGNVEAGRVWAFRSNEDNSEQYLLQAI CCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA