Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899844

Identifier: 159899844

GI number: 159899844

Start: 4195808

End: 4197043

Strand: Direct

Name: 159899844

Synonym: Haur_3327

Alternate gene names: NA

Gene position: 4195808-4197043 (Clockwise)

Preceding gene: 159899843

Following gene: 159899845

Centisome position: 66.11

GC content: 48.14

Gene sequence:

>1236_bases
ATGGCTAAAATGTGGTTTGTTGCTCGACGCGATTTGATGTACCATCTGCGCAAAAAAGATTTTTATTGGTCAACCTTGGG
CGTGCCCTTGCTCATTGGCGCGATCTATCTGTTTGCCCAAGTGTTTGGCGGCGATCCGTCGGGCCAGGCCACGGCTAATC
TTTTTTTACCCAGCACCGATCGGGCGCATAGCATCGGTGTCGTTGACCAATCGGCGGTGCTCAAACAACATTTCGAGGTT
ATTTCACCAACAACCCTCTTGCAATTTGATGATCGCAACGTGGCTGAACAAGCGTTACGCCAAGCAACAATTGAAACCTT
GTTCATTATTCCAGCAGATTATCATCAATCGGGAATAGTCACCCGTACCACCCGCACAGCAAGTGTGTTTGATCAAGCTG
ATACCAACGCCTTGCGTAGCTTGTTAGCAGCCAATCAACTGCGCTCTCCGCACATTGATTTTGTGCCGCTGCTCTTCGAA
CCAATTAGCCTGAGCAAAGCTGAAGCAATTGGCCAAAATGTCCGGGTTGCTGGCAACTTAAGCCAAAATTTTGCTGGCTC
GATGGTGCCAATCGGCTTTGCAATGGCGATTTACATTTCGATTTTTATGGGCGCAAGTTTGTTGATGCAAGGAATTTTGG
AGGAGAAAGAAAATCGCACGCTTGAAGTATTGCTCACCTCGATCTCGCCACGCCAATTATTAACTGGCAAAATGCTGGGT
TTAGGCATCGTAGCCTTTATTCAATTGGGATTTTGGGCAGCACTGGCCTTAGGGGTGTTGCGCGGGCAAGCCATTCGTGA
AGCGCTCAATCAAGTTCAAATCGATTCAGTCACTTGGATGTTGCTCGGGATCTTTTTTCTGCTCGGCTACCTATTTTACG
CTAGCCTAACCGCTGGAATTGGGGCAATCAGCCCATCAATGCGCGAATTATCGCAATTAATTATTTTGGTGAGTGTGCCA
GCGATGATTCCGCTGATGTTTATTACCTCGTTGCTGAGCAAACCCAACGGCGCTTTAGCCCTCATCCTCAGCATAATCCC
CTTTACCGCTCCATCAACGATGATGCTTCGTTCAGTCATGACGGTTGTGCCACCTTGGCAAATAGGATTAAGTATTGGTT
TGCTAGCGTTAGCTGTCGTAGCAACTCTCAGTGTTACTGCCCGCTTATTTCGCGCCACTATTTTGTTACGCGGCAGTAAA
TTTTCGTTACGCGGGTTATGGCAGGCGTTGCGCTAG

Upstream 100 bases:

>100_bases
ACCAGCAACGATCTTTGGAAAGTTTTAGGCGTTTGGCGCTTCCCTGAATCAACGAGCTTTGTAGTCCACCAAAATCATCT
TGAGCGAACGGAGGCTGGGC

Downstream 100 bases:

>100_bases
CCCACGGAGGCAGTATGGAATCAATTGTGCATATTGTTCTAGCCCTGTTGCGGCGTGAAAATCAGGTGTTATTGGTGCGT
CAACAAGGCCAAAATGGCAG

Product: Na+ efflux ABC transporter permease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MAKMWFVARRDLMYHLRKKDFYWSTLGVPLLIGAIYLFAQVFGGDPSGQATANLFLPSTDRAHSIGVVDQSAVLKQHFEV
ISPTTLLQFDDRNVAEQALRQATIETLFIIPADYHQSGIVTRTTRTASVFDQADTNALRSLLAANQLRSPHIDFVPLLFE
PISLSKAEAIGQNVRVAGNLSQNFAGSMVPIGFAMAIYISIFMGASLLMQGILEEKENRTLEVLLTSISPRQLLTGKMLG
LGIVAFIQLGFWAALALGVLRGQAIREALNQVQIDSVTWMLLGIFFLLGYLFYASLTAGIGAISPSMRELSQLIILVSVP
AMIPLMFITSLLSKPNGALALILSIIPFTAPSTMMLRSVMTVVPPWQIGLSIGLLALAVVATLSVTARLFRATILLRGSK
FSLRGLWQALR

Sequences:

>Translated_411_residues
MAKMWFVARRDLMYHLRKKDFYWSTLGVPLLIGAIYLFAQVFGGDPSGQATANLFLPSTDRAHSIGVVDQSAVLKQHFEV
ISPTTLLQFDDRNVAEQALRQATIETLFIIPADYHQSGIVTRTTRTASVFDQADTNALRSLLAANQLRSPHIDFVPLLFE
PISLSKAEAIGQNVRVAGNLSQNFAGSMVPIGFAMAIYISIFMGASLLMQGILEEKENRTLEVLLTSISPRQLLTGKMLG
LGIVAFIQLGFWAALALGVLRGQAIREALNQVQIDSVTWMLLGIFFLLGYLFYASLTAGIGAISPSMRELSQLIILVSVP
AMIPLMFITSLLSKPNGALALILSIIPFTAPSTMMLRSVMTVVPPWQIGLSIGLLALAVVATLSVTARLFRATILLRGSK
FSLRGLWQALR
>Mature_410_residues
AKMWFVARRDLMYHLRKKDFYWSTLGVPLLIGAIYLFAQVFGGDPSGQATANLFLPSTDRAHSIGVVDQSAVLKQHFEVI
SPTTLLQFDDRNVAEQALRQATIETLFIIPADYHQSGIVTRTTRTASVFDQADTNALRSLLAANQLRSPHIDFVPLLFEP
ISLSKAEAIGQNVRVAGNLSQNFAGSMVPIGFAMAIYISIFMGASLLMQGILEEKENRTLEVLLTSISPRQLLTGKMLGL
GIVAFIQLGFWAALALGVLRGQAIREALNQVQIDSVTWMLLGIFFLLGYLFYASLTAGIGAISPSMRELSQLIILVSVPA
MIPLMFITSLLSKPNGALALILSIIPFTAPSTMMLRSVMTVVPPWQIGLSIGLLALAVVATLSVTARLFRATILLRGSKF
SLRGLWQALR

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yhaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44895; Mature: 44764

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKMWFVARRDLMYHLRKKDFYWSTLGVPLLIGAIYLFAQVFGGDPSGQATANLFLPSTD
CCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RAHSIGVVDQSAVLKQHFEVISPTTLLQFDDRNVAEQALRQATIETLFIIPADYHQSGIV
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCE
TRTTRTASVFDQADTNALRSLLAANQLRSPHIDFVPLLFEPISLSKAEAIGQNVRVAGNL
EECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHCCCCEEEECCC
SQNFAGSMVPIGFAMAIYISIFMGASLLMQGILEEKENRTLEVLLTSISPRQLLTGKMLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHEECCCCHHHHHHHHHH
LGIVAFIQLGFWAALALGVLRGQAIREALNQVQIDSVTWMLLGIFFLLGYLFYASLTAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAISPSMRELSQLIILVSVPAMIPLMFITSLLSKPNGALALILSIIPFTAPSTMMLRSVM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH
TVVPPWQIGLSIGLLALAVVATLSVTARLFRATILLRGSKFSLRGLWQALR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
>Mature Secondary Structure 
AKMWFVARRDLMYHLRKKDFYWSTLGVPLLIGAIYLFAQVFGGDPSGQATANLFLPSTD
CCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RAHSIGVVDQSAVLKQHFEVISPTTLLQFDDRNVAEQALRQATIETLFIIPADYHQSGIV
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCE
TRTTRTASVFDQADTNALRSLLAANQLRSPHIDFVPLLFEPISLSKAEAIGQNVRVAGNL
EECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHCCCCEEEECCC
SQNFAGSMVPIGFAMAIYISIFMGASLLMQGILEEKENRTLEVLLTSISPRQLLTGKMLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHEECCCCHHHHHHHHHH
LGIVAFIQLGFWAALALGVLRGQAIREALNQVQIDSVTWMLLGIFFLLGYLFYASLTAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAISPSMRELSQLIILVSVPAMIPLMFITSLLSKPNGALALILSIIPFTAPSTMMLRSVM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHH
TVVPPWQIGLSIGLLALAVVATLSVTARLFRATILLRGSKFSLRGLWQALR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]