Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899711
Identifier: 159899711
GI number: 159899711
Start: 4039972
End: 4040364
Strand: Direct
Name: 159899711
Synonym: Haur_3193
Alternate gene names: NA
Gene position: 4039972-4040364 (Clockwise)
Preceding gene: 159899708
Following gene: 159899716
Centisome position: 63.66
GC content: 51.91
Gene sequence:
>393_bases ATGTCGCAAGCATTGTTAATTTTTGATGGAACCTGCGATTTTTGCACGCGGGCCGCCCGTTGGATCAAAAACCTCGATCA CCAACAACGAATTCGGATCGAGCCATTTCAAAAACCTGGCGTGCCCGAATCGGTTGGCTTGACCTATGCTCAATGTGAGC AAGCAGCATGGTTGCAAACCAGCGACGGCAGACTATGGCGTGGGGCCGGGGCGGTTAATGCAGCCCTGAGCATCGCCACG GGCAAGCGTTTGGCCTTAGGCTTTTATCAACTTTGGGGTATTCGCCACATTCAGGATAGCGTCTATAAGTTGGTGGTCAA ATATCGCCATCGTATCCCAGGTGATACACCCCATTGCCAACAATTCCCTGCCGATTGCCCGAAATTAGGCTGA
Upstream 100 bases:
>100_bases GCCGCACGCCAGCCTCAATCGGCTGAATTTCGGCCTGATTGGGTGTCCAGGCATGCCAGCGCCGCCCCCAGAACGAGCGA AAAGCCATTAGGAGACTCCT
Downstream 100 bases:
>100_bases GCTAAGTTGTTCGAGCAGCCATTCGAGCGCACGTTTGGCCGAAGCTTGTTTGTTGCCCAAACGATCGTAGGGCCAAACAT GCTGCTCGACCAAGCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSQALLIFDGTCDFCTRAARWIKNLDHQQRIRIEPFQKPGVPESVGLTYAQCEQAAWLQTSDGRLWRGAGAVNAALSIAT GKRLALGFYQLWGIRHIQDSVYKLVVKYRHRIPGDTPHCQQFPADCPKLG
Sequences:
>Translated_130_residues MSQALLIFDGTCDFCTRAARWIKNLDHQQRIRIEPFQKPGVPESVGLTYAQCEQAAWLQTSDGRLWRGAGAVNAALSIAT GKRLALGFYQLWGIRHIQDSVYKLVVKYRHRIPGDTPHCQQFPADCPKLG >Mature_129_residues SQALLIFDGTCDFCTRAARWIKNLDHQQRIRIEPFQKPGVPESVGLTYAQCEQAAWLQTSDGRLWRGAGAVNAALSIATG KRLALGFYQLWGIRHIQDSVYKLVVKYRHRIPGDTPHCQQFPADCPKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14640; Mature: 14509
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQALLIFDGTCDFCTRAARWIKNLDHQQRIRIEPFQKPGVPESVGLTYAQCEQAAWLQT CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHCCHHHHHHCCCEEEC SDGRLWRGAGAVNAALSIATGKRLALGFYQLWGIRHIQDSVYKLVVKYRHRIPGDTPHCQ CCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QFPADCPKLG CCCCCCCCCC >Mature Secondary Structure SQALLIFDGTCDFCTRAARWIKNLDHQQRIRIEPFQKPGVPESVGLTYAQCEQAAWLQT CCEEEEECCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHCCHHHHHHCCCEEEC SDGRLWRGAGAVNAALSIATGKRLALGFYQLWGIRHIQDSVYKLVVKYRHRIPGDTPHCQ CCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QFPADCPKLG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA