Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899710

Identifier: 159899710

GI number: 159899710

Start: 4039183

End: 4039959

Strand: Reverse

Name: 159899710

Synonym: Haur_3192

Alternate gene names: NA

Gene position: 4039959-4039183 (Counterclockwise)

Preceding gene: 159899712

Following gene: 159899709

Centisome position: 63.66

GC content: 52.9

Gene sequence:

>777_bases
ATGGCTTTTCGCTCGTTCTGGGGGCGGCGCTGGCATGCCTGGACACCCAATCAGGCCGAAATTCAGCCGATTGAGGCTGG
CGTGCGGCTTGCCCTCCATCAGCATGATCGCATGGTTTATAGTGATGCGCAATTGGATGATTATGTTGAAAACGGCTTGA
GCTGGTATGCTCCAGTTCGTTTGCAACTCGAAGCGCGGTTTTTGGGCGAGCCTGAGGATTTTGTGGGTACGGCAGGCTTT
GGCTGGTGGAATGATCCGGCTGGCACGGGCTTGCGGCGTTTGCGACTACCCCAAGCCTTGTGGTTTTTCTATGCGGGTGC
TGCTAGCCAACTTGAATTAACCGCCAATGGCGCACATAACGGTTGGTTGGCGATGAGCTTTGTGCCGCGCTTGGGCTGGT
GTTTGGGCTTGTTGCCACTCGCTCCGTTGGCCTTGGTGCTGAGCCAAAACACGTGGTTACGCCAACGCTGTTGCTTGCCA
TTGTTGCAACTGGCTTTGGGCGTGCGCAGCCAGCCAATCAAACTTCGCTGGAATACGTGGCAGCAGTATCAAATCGACTG
GTATGCTGATCGGGTGGAATTTTGGCTTGATCAGCAATTAGTGCTCCAAATCGCCAGCGTGCCAACCAGCGATTTGGGTT
TGATTCTATGGCTCGATAACCAATATGCCCAAGTTTCGCCCCGTGGAATTGTACGTGGTGGTATACTTGCTCATCAAAAT
CAAGCCTTAGAAATTCGTCATTTAACGATTAGCGACCTAACAACACCTGCACTCTAG

Upstream 100 bases:

>100_bases
GTTGTTGGTGATCGAGGTTTTTGATCCAACGGGCGGCCCGCGTGCAAAAATCGCAGGTTCCATCAAAAATTAACAATGCT
TGCGACATAGGAGTCTCCTA

Downstream 100 bases:

>100_bases
TATGCTTGACAGCCTCAGGTGGACTTTTACAATAGCCAGATATTGTTGTTACACCTGGAGGAACCACAATGCGGTCTTTT
CGATGGAGTTTACTAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MAFRSFWGRRWHAWTPNQAEIQPIEAGVRLALHQHDRMVYSDAQLDDYVENGLSWYAPVRLQLEARFLGEPEDFVGTAGF
GWWNDPAGTGLRRLRLPQALWFFYAGAASQLELTANGAHNGWLAMSFVPRLGWCLGLLPLAPLALVLSQNTWLRQRCCLP
LLQLALGVRSQPIKLRWNTWQQYQIDWYADRVEFWLDQQLVLQIASVPTSDLGLILWLDNQYAQVSPRGIVRGGILAHQN
QALEIRHLTISDLTTPAL

Sequences:

>Translated_258_residues
MAFRSFWGRRWHAWTPNQAEIQPIEAGVRLALHQHDRMVYSDAQLDDYVENGLSWYAPVRLQLEARFLGEPEDFVGTAGF
GWWNDPAGTGLRRLRLPQALWFFYAGAASQLELTANGAHNGWLAMSFVPRLGWCLGLLPLAPLALVLSQNTWLRQRCCLP
LLQLALGVRSQPIKLRWNTWQQYQIDWYADRVEFWLDQQLVLQIASVPTSDLGLILWLDNQYAQVSPRGIVRGGILAHQN
QALEIRHLTISDLTTPAL
>Mature_257_residues
AFRSFWGRRWHAWTPNQAEIQPIEAGVRLALHQHDRMVYSDAQLDDYVENGLSWYAPVRLQLEARFLGEPEDFVGTAGFG
WWNDPAGTGLRRLRLPQALWFFYAGAASQLELTANGAHNGWLAMSFVPRLGWCLGLLPLAPLALVLSQNTWLRQRCCLPL
LQLALGVRSQPIKLRWNTWQQYQIDWYADRVEFWLDQQLVLQIASVPTSDLGLILWLDNQYAQVSPRGIVRGGILAHQNQ
ALEIRHLTISDLTTPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29481; Mature: 29350

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRSFWGRRWHAWTPNQAEIQPIEAGVRLALHQHDRMVYSDAQLDDYVENGLSWYAPVR
CCCHHHHCCCCCCCCCCCCCEEEHHHHHEEEEECCCCEEECCCHHHHHHHCCCCEEEEEE
LQLEARFLGEPEDFVGTAGFGWWNDPAGTGLRRLRLPQALWFFYAGAASQLELTANGAHN
EEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
GWLAMSFVPRLGWCLGLLPLAPLALVLSQNTWLRQRCCLPLLQLALGVRSQPIKLRWNTW
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
QQYQIDWYADRVEFWLDQQLVLQIASVPTSDLGLILWLDNQYAQVSPRGIVRGGILAHQN
EEEEEEEEHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCEEECCEEECCC
QALEIRHLTISDLTTPAL
CEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
AFRSFWGRRWHAWTPNQAEIQPIEAGVRLALHQHDRMVYSDAQLDDYVENGLSWYAPVR
CCHHHHCCCCCCCCCCCCCEEEHHHHHEEEEECCCCEEECCCHHHHHHHCCCCEEEEEE
LQLEARFLGEPEDFVGTAGFGWWNDPAGTGLRRLRLPQALWFFYAGAASQLELTANGAHN
EEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
GWLAMSFVPRLGWCLGLLPLAPLALVLSQNTWLRQRCCLPLLQLALGVRSQPIKLRWNTW
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
QQYQIDWYADRVEFWLDQQLVLQIASVPTSDLGLILWLDNQYAQVSPRGIVRGGILAHQN
EEEEEEEEHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCEEECCEEECCC
QALEIRHLTISDLTTPAL
CEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA