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The map label for this gene is ygaD [C]

Identifier: 159899712

GI number: 159899712

Start: 4040356

End: 4040835

Strand: Reverse

Name: ygaD [C]

Synonym: Haur_3194

Alternate gene names: 159899712

Gene position: 4040835-4040356 (Counterclockwise)

Preceding gene: 159899713

Following gene: 159899710

Centisome position: 63.67

GC content: 56.04

Gene sequence:

>480_bases
ATGTCGCAAGCCTTAGCCCAAGCTGTGATTACCGCCCTTGCCCAACGCCAATGGACGCTGGCGACCGCTGAATCGTGTAC
TGGCGGGTTGTTGGGCGATTGGCTGACCAACATTGCTGGCAGCTCAGTCGTCTATTTGGGCGGCATTATTGCCTATGCCA
ATAGCGCCAAGCAAACGTTGCTGCATGTGCCAACTTCAACCTTGGCGACCGTTGGCGCGGTGAGTGCTGAAACCGCTTTA
GCTATGGCGCAAGGGACGGCTCAAGCACTCGGCGCGACGGTTGGCCTAAGCACGACTGGCATTGCTGGTCCAGGTGGTGG
CAGCCCTGAAAAACCAGTCGGCTTAGTTTATTTGGGTTTGCACTTGCCCAATCAAGGCTTGGTCGAGCAGCATGTTTGGC
CCTACGATCGTTTGGGCAACAAACAAGCTTCGGCCAAACGTGCGCTCGAATGGCTGCTCGAACAACTTAGCTCAGCCTAA

Upstream 100 bases:

>100_bases
GTGTTTCGCATCGCAATTAAGCTCTTGATTATCGGCACGATTATTTATTTAGGTTTGGCAGCATTTGGTCTGCTGAGCAA
ACGCCGTTGAGGAATTGCCA

Downstream 100 bases:

>100_bases
TTTCGGGCAATCGGCAGGGAATTGTTGGCAATGGGGTGTATCACCTGGGATACGATGGCGATATTTGACCACCAACTTAT
AGACGCTATCCTGAATGTGG

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSQALAQAVITALAQRQWTLATAESCTGGLLGDWLTNIAGSSVVYLGGIIAYANSAKQTLLHVPTSTLATVGAVSAETAL
AMAQGTAQALGATVGLSTTGIAGPGGGSPEKPVGLVYLGLHLPNQGLVEQHVWPYDRLGNKQASAKRALEWLLEQLSSA

Sequences:

>Translated_159_residues
MSQALAQAVITALAQRQWTLATAESCTGGLLGDWLTNIAGSSVVYLGGIIAYANSAKQTLLHVPTSTLATVGAVSAETAL
AMAQGTAQALGATVGLSTTGIAGPGGGSPEKPVGLVYLGLHLPNQGLVEQHVWPYDRLGNKQASAKRALEWLLEQLSSA
>Mature_158_residues
SQALAQAVITALAQRQWTLATAESCTGGLLGDWLTNIAGSSVVYLGGIIAYANSAKQTLLHVPTSTLATVGAVSAETALA
MAQGTAQALGATVGLSTTGIAGPGGGSPEKPVGLVYLGLHLPNQGLVEQHVWPYDRLGNKQASAKRALEWLLEQLSSA

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=153, Percent_Identity=39.2156862745098, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787818, Length=123, Percent_Identity=34.9593495934959, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16208; Mature: 16076

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQALAQAVITALAQRQWTLATAESCTGGLLGDWLTNIAGSSVVYLGGIIAYANSAKQTL
CCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHE
LHVPTSTLATVGAVSAETALAMAQGTAQALGATVGLSTTGIAGPGGGSPEKPVGLVYLGL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE
HLPNQGLVEQHVWPYDRLGNKQASAKRALEWLLEQLSSA
ECCCCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQALAQAVITALAQRQWTLATAESCTGGLLGDWLTNIAGSSVVYLGGIIAYANSAKQTL
CHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHE
LHVPTSTLATVGAVSAETALAMAQGTAQALGATVGLSTTGIAGPGGGSPEKPVGLVYLGL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE
HLPNQGLVEQHVWPYDRLGNKQASAKRALEWLLEQLSSA
ECCCCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA