Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899688
Identifier: 159899688
GI number: 159899688
Start: 4002844
End: 4003191
Strand: Direct
Name: 159899688
Synonym: Haur_3170
Alternate gene names: NA
Gene position: 4002844-4003191 (Clockwise)
Preceding gene: 159899687
Following gene: 159899693
Centisome position: 63.07
GC content: 45.4
Gene sequence:
>348_bases ATGGGTAATCAAGCTGAAACAGTGGTAATTGTGGGGCCATGTGCCGCAGGTAAATCAACCTTACGCCAAGGTTTAGAAAC CCATGGAATCCAAGTGCGAGTGATTGCTCAAGAACATTCGGGTATTCGTGGGCTTTGGCGCAAACATCAAGCCAACTACT TAATTTATCTTGATGTAGATTTACCAGCTGTGCATGAACGTGGCCGACCCAGTTTCCCTGCTTGGTTGCACAATCAACAG CAACAGCGTTTACAAGAAGCGCGAGCTGCTGCCGATATTTATCTCGATACAACCAAACATTCGATCAACGATGTACTAAA TCGAGTACTTTCGACGATCAAGCACTAA
Upstream 100 bases:
>100_bases TTCGCCGCATGACCGTATGTTTTCCGGTTGAACGAGCCTAATTTACAGGCTTCATCGTTGCCAAGCTGGCGGTCAGCAGA TACGCTGAAAGGAACCGCCG
Downstream 100 bases:
>100_bases ACGATCAAGCCTACTTGATTAATCGTAAAGATTAGCAAGTAGGCTTGATCGTTTGCATTATGACTAAAAACAACAACACC GCGAGCTTACTCACGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGNQAETVVIVGPCAAGKSTLRQGLETHGIQVRVIAQEHSGIRGLWRKHQANYLIYLDVDLPAVHERGRPSFPAWLHNQQ QQRLQEARAAADIYLDTTKHSINDVLNRVLSTIKH
Sequences:
>Translated_115_residues MGNQAETVVIVGPCAAGKSTLRQGLETHGIQVRVIAQEHSGIRGLWRKHQANYLIYLDVDLPAVHERGRPSFPAWLHNQQ QQRLQEARAAADIYLDTTKHSINDVLNRVLSTIKH >Mature_114_residues GNQAETVVIVGPCAAGKSTLRQGLETHGIQVRVIAQEHSGIRGLWRKHQANYLIYLDVDLPAVHERGRPSFPAWLHNQQQ QRLQEARAAADIYLDTTKHSINDVLNRVLSTIKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12924; Mature: 12793
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNQAETVVIVGPCAAGKSTLRQGLETHGIQVRVIAQEHSGIRGLWRKHQANYLIYLDVD CCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECC LPAVHERGRPSFPAWLHNQQQQRLQEARAAADIYLDTTKHSINDVLNRVLSTIKH CCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNQAETVVIVGPCAAGKSTLRQGLETHGIQVRVIAQEHSGIRGLWRKHQANYLIYLDVD CCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECC LPAVHERGRPSFPAWLHNQQQQRLQEARAAADIYLDTTKHSINDVLNRVLSTIKH CCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA