Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899687
Identifier: 159899687
GI number: 159899687
Start: 4002068
End: 4002784
Strand: Direct
Name: 159899687
Synonym: Haur_3169
Alternate gene names: NA
Gene position: 4002068-4002784 (Clockwise)
Preceding gene: 159899685
Following gene: 159899688
Centisome position: 63.06
GC content: 48.68
Gene sequence:
>717_bases ATGTTGGAACTGCAAGTTGGTGTTGCAAAAGTTGGCAAATATGCCACCCCCGAAAGCGGCGACACCCTTGAGATGATCGA ACGACCGCATGGCGGATTTTCGTTTGTATTAGCCGATGGGCAAGGTAGTGGGCGAGGAGCCAAGACCCTGAGTAACCTTG TAACAACCAGGGCAATTTCAATGCTCAAAGATGGAGCACGCGATGGTGCTGTTGCTCGCGCGGTTCACGATTACCTGTAT GCCTATCGTCATGGGCAAGTCTCAGCAACGCTTAATATACTTTCAGTAGATCTTTCAGCGCGAAGTGTGTTAGTATCAAG AAATAACCCTTGCCCATTTTATGTGATCGATGAGCAGGGGATGACGACCTACAACGAGCCATCGACCCCAATTGGGCTCT ACTCGATGACCAAACCAGTCATCACCAAAATTAGCCTACGGCCTTATGTCTATGTCGTCGTGTTTACCGATGGCATTCTG CATGCAGGCCGACGCTATAACGAAAGTATTGAGCTAGACAACTATCTTGGCAATTTTAATGTTCGCCAAGGACGAACAGC CCAAGAAGTTACCGATGATTTACTAGGACGTGCCGTGGAACTTGATCAAAATCGACCGAACGACGATATGAGCGTGATCG TGATGGCCGCCTTACCGATGGAGTCGGAAAATAAAGTTCGCCGCATGACCGTATGTTTTCCGGTTGAACGAGCCTAA
Upstream 100 bases:
>100_bases CTGTTGCTAGGCCAATTGTACCGCACCCAAGGCGGGCTGTCTCGTGGTATGATGCAAGTAAGGCAATCGCACCATCAATA CTAGAAATCTGAGGATTGTT
Downstream 100 bases:
>100_bases TTTACAGGCTTCATCGTTGCCAAGCTGGCGGTCAGCAGATACGCTGAAAGGAACCGCCGATGGGTAATCAAGCTGAAACA GTGGTAATTGTGGGGCCATG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Stage II Sporulation E Family Protein; Stage II Sporulation Protein E
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLELQVGVAKVGKYATPESGDTLEMIERPHGGFSFVLADGQGSGRGAKTLSNLVTTRAISMLKDGARDGAVARAVHDYLY AYRHGQVSATLNILSVDLSARSVLVSRNNPCPFYVIDEQGMTTYNEPSTPIGLYSMTKPVITKISLRPYVYVVVFTDGIL HAGRRYNESIELDNYLGNFNVRQGRTAQEVTDDLLGRAVELDQNRPNDDMSVIVMAALPMESENKVRRMTVCFPVERA
Sequences:
>Translated_238_residues MLELQVGVAKVGKYATPESGDTLEMIERPHGGFSFVLADGQGSGRGAKTLSNLVTTRAISMLKDGARDGAVARAVHDYLY AYRHGQVSATLNILSVDLSARSVLVSRNNPCPFYVIDEQGMTTYNEPSTPIGLYSMTKPVITKISLRPYVYVVVFTDGIL HAGRRYNESIELDNYLGNFNVRQGRTAQEVTDDLLGRAVELDQNRPNDDMSVIVMAALPMESENKVRRMTVCFPVERA >Mature_238_residues MLELQVGVAKVGKYATPESGDTLEMIERPHGGFSFVLADGQGSGRGAKTLSNLVTTRAISMLKDGARDGAVARAVHDYLY AYRHGQVSATLNILSVDLSARSVLVSRNNPCPFYVIDEQGMTTYNEPSTPIGLYSMTKPVITKISLRPYVYVVVFTDGIL HAGRRYNESIELDNYLGNFNVRQGRTAQEVTDDLLGRAVELDQNRPNDDMSVIVMAALPMESENKVRRMTVCFPVERA
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26224; Mature: 26224
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELQVGVAKVGKYATPESGDTLEMIERPHGGFSFVLADGQGSGRGAKTLSNLVTTRAIS CEEEEECHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH MLKDGARDGAVARAVHDYLYAYRHGQVSATLNILSVDLSARSVLVSRNNPCPFYVIDEQG HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCEEEECCCC MTTYNEPSTPIGLYSMTKPVITKISLRPYVYVVVFTDGILHAGRRYNESIELDNYLGNFN CEECCCCCCCEEEHHCCCHHHEEEECCCEEEEEEEECCHHHCCCCCCCCEEECHHCCCCC VRQGRTAQEVTDDLLGRAVELDQNRPNDDMSVIVMAALPMESENKVRRMTVCFPVERA CCCCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure MLELQVGVAKVGKYATPESGDTLEMIERPHGGFSFVLADGQGSGRGAKTLSNLVTTRAIS CEEEEECHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH MLKDGARDGAVARAVHDYLYAYRHGQVSATLNILSVDLSARSVLVSRNNPCPFYVIDEQG HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCEEEECCCC MTTYNEPSTPIGLYSMTKPVITKISLRPYVYVVVFTDGILHAGRRYNESIELDNYLGNFN CEECCCCCCCEEEHHCCCHHHEEEECCCEEEEEEEECCHHHCCCCCCCCEEECHHCCCCC VRQGRTAQEVTDDLLGRAVELDQNRPNDDMSVIVMAALPMESENKVRRMTVCFPVERA CCCCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA