Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899686
Identifier: 159899686
GI number: 159899686
Start: 4000942
End: 4001955
Strand: Reverse
Name: 159899686
Synonym: Haur_3168
Alternate gene names: NA
Gene position: 4001955-4000942 (Counterclockwise)
Preceding gene: 159899689
Following gene: 159899683
Centisome position: 63.06
GC content: 49.01
Gene sequence:
>1014_bases GTGGAGCAGCGTGTTTTACGATTTGAAACACATACTGGGGTGCGCATCTACAGCCTTCCTGTAGAGGTTTTCCCTCAATT TTATGCCAATGTGTATCTGGTTATCGCCGATGGTTTGGTCTGTTTGATCGATACTGGCTCCGGTCATGGCAATTCGAATA CCGATCTGGTCGCTGGCTTTGCCGCAATTCAAGCTCTATGGGGCGAGAAGCTGAGTTTGGCCGATGTTAATCAGATTATT TTGACCCACGCTCATATCGATCATTTTGGCGGCTTAGGGTTTGTGCGCCAATTTACCCAAGCTCCGACTGCTATCCACAT TGCTGATCGGCGGGTGATTACCAATTATGATGGGCGCTTGTTGTTTGCTTCCAAGGCATTAAGTCGCTTTTTGCGCCATG CGGGGGTTTCGGCTGAGCAACATCAGCATTTGATGGGTATGTATTTGCATAATAAAGATGCGTTTCGGCCTCAGCCGATT GAGCAAACCTTTGAAGATGGCGATCGGCTTTGCAATTTGTTTGAGGTTATTTACACACCTGGCCATTGCCCGGGCCAAGT TTGTTTACGTTTGGATGAGGTGTTGTTTAGTGCTGATCATATTTTGGCCCGCACCGCTCCGCATCTTGCGCCCGAAATGA TTACCCCAGGCACAGGCTTGGAGCATTATATTAGTGGCTTGCGCCAAGTTGCCAAACTCGATGGCATTGAATTGACCTTG GGCGGCCACGAGCAGCCAATCGAAAACTTAGCCCAGCGCTTAGAGCAAATTTTCGCTTCTAATCAACGTAAAATCGATCG GATTAGCGATTTGCTCAAGGCCCAGCCGCAAACTGTTGCCCAGCTTAGCGCCGCCATGTATCGTGGTTTACAGGGCTACG ATCAGTTATTGGGCATCGAAAAAGTGGGCGCATTCGTCGAATATTTGTATCTGCGCGGCTATGTGCGGCCAGTCAACATC GCCCCCGACAACGACGACCGCGACCCGATTAATGTGATGTATGAATTGTTTTAA
Upstream 100 bases:
>100_bases ATTTCTAGTATTGATGGTGCGATTGCCTTACTTGCATCATACCACGAGACAGCCCGCCTTGGGTGCGGTACAATTGGCCT AGCAACAGAAGGAGGTCTCT
Downstream 100 bases:
>100_bases GTGCTACCCTGTGTTCTGATAGCACCAATGATCCTTTGGTTTATCGAGCGATGTCTGTCTGCCCTCATTGCTCTTGAGGG GGTGCTGGGGGATTAAAGCC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase; Beta Lactamase; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolases; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MEQRVLRFETHTGVRIYSLPVEVFPQFYANVYLVIADGLVCLIDTGSGHGNSNTDLVAGFAAIQALWGEKLSLADVNQII LTHAHIDHFGGLGFVRQFTQAPTAIHIADRRVITNYDGRLLFASKALSRFLRHAGVSAEQHQHLMGMYLHNKDAFRPQPI EQTFEDGDRLCNLFEVIYTPGHCPGQVCLRLDEVLFSADHILARTAPHLAPEMITPGTGLEHYISGLRQVAKLDGIELTL GGHEQPIENLAQRLEQIFASNQRKIDRISDLLKAQPQTVAQLSAAMYRGLQGYDQLLGIEKVGAFVEYLYLRGYVRPVNI APDNDDRDPINVMYELF
Sequences:
>Translated_337_residues MEQRVLRFETHTGVRIYSLPVEVFPQFYANVYLVIADGLVCLIDTGSGHGNSNTDLVAGFAAIQALWGEKLSLADVNQII LTHAHIDHFGGLGFVRQFTQAPTAIHIADRRVITNYDGRLLFASKALSRFLRHAGVSAEQHQHLMGMYLHNKDAFRPQPI EQTFEDGDRLCNLFEVIYTPGHCPGQVCLRLDEVLFSADHILARTAPHLAPEMITPGTGLEHYISGLRQVAKLDGIELTL GGHEQPIENLAQRLEQIFASNQRKIDRISDLLKAQPQTVAQLSAAMYRGLQGYDQLLGIEKVGAFVEYLYLRGYVRPVNI APDNDDRDPINVMYELF >Mature_337_residues MEQRVLRFETHTGVRIYSLPVEVFPQFYANVYLVIADGLVCLIDTGSGHGNSNTDLVAGFAAIQALWGEKLSLADVNQII LTHAHIDHFGGLGFVRQFTQAPTAIHIADRRVITNYDGRLLFASKALSRFLRHAGVSAEQHQHLMGMYLHNKDAFRPQPI EQTFEDGDRLCNLFEVIYTPGHCPGQVCLRLDEVLFSADHILARTAPHLAPEMITPGTGLEHYISGLRQVAKLDGIELTL GGHEQPIENLAQRLEQIFASNQRKIDRISDLLKAQPQTVAQLSAAMYRGLQGYDQLLGIEKVGAFVEYLYLRGYVRPVNI APDNDDRDPINVMYELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37731; Mature: 37731
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRVLRFETHTGVRIYSLPVEVFPQFYANVYLVIADGLVCLIDTGSGHGNSNTDLVAGF CCCCEEEEECCCCEEEEECCHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCCCHHHHHH AAIQALWGEKLSLADVNQIILTHAHIDHFGGLGFVRQFTQAPTAIHIADRRVITNYDGRL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCEEEECCCCEE LFASKALSRFLRHAGVSAEQHQHLMGMYLHNKDAFRPQPIEQTFEDGDRLCNLFEVIYTP EHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GHCPGQVCLRLDEVLFSADHILARTAPHLAPEMITPGTGLEHYISGLRQVAKLDGIELTL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCEEEEE GGHEQPIENLAQRLEQIFASNQRKIDRISDLLKAQPQTVAQLSAAMYRGLQGYDQLLGIE CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHH KVGAFVEYLYLRGYVRPVNIAPDNDDRDPINVMYELF HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCC >Mature Secondary Structure MEQRVLRFETHTGVRIYSLPVEVFPQFYANVYLVIADGLVCLIDTGSGHGNSNTDLVAGF CCCCEEEEECCCCEEEEECCHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCCCHHHHHH AAIQALWGEKLSLADVNQIILTHAHIDHFGGLGFVRQFTQAPTAIHIADRRVITNYDGRL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCEEEECCCCEE LFASKALSRFLRHAGVSAEQHQHLMGMYLHNKDAFRPQPIEQTFEDGDRLCNLFEVIYTP EHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GHCPGQVCLRLDEVLFSADHILARTAPHLAPEMITPGTGLEHYISGLRQVAKLDGIELTL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCEEEEE GGHEQPIENLAQRLEQIFASNQRKIDRISDLLKAQPQTVAQLSAAMYRGLQGYDQLLGIE CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHH KVGAFVEYLYLRGYVRPVNIAPDNDDRDPINVMYELF HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA