Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899683
Identifier: 159899683
GI number: 159899683
Start: 3997511
End: 3998218
Strand: Reverse
Name: 159899683
Synonym: Haur_3165
Alternate gene names: NA
Gene position: 3998218-3997511 (Counterclockwise)
Preceding gene: 159899686
Following gene: 159899682
Centisome position: 63.0
GC content: 47.6
Gene sequence:
>708_bases ATGAAACATTACCGAATAGTTGTAAGCTTTATGGTCTTTGGAAGTCTCTCGGTTGCGGCCTGTGGTCGAACCAGTTTGCC AAATACCGAACCGATTCTTCGCCCTCAAGAGAGTCGAAATCAGCCAATCACCGCTGTTGTTGTGCCTACTACCACCGTTG ATCTTACCGCCACGATCCTTGATCAAACTGCTATAGTAGAAGGCGCGACTAAAGAAGCTGAGTATTTAGCCTTCGAACAA TACCTTGCTGATAAAACGGCGACGAGCCTTGCAGAGCTGCCCTCTACTGCACCCCCATGGCCTACATACGAACCCGTAAC CCCATCGCCAACTAGGGAATATCGCTTGTTTGCGCATCTTGAATGCACAACCGATGAGCCTGGGCCAGCAATATTTGTCA CGAATTGCTGGCATGGCGTGATTAACAATAAAGACTTTGTGGTTTATGGCCATGGGATCCGGAATAAAGCTGCCAATAAT AAAATCGTGGGTGGCTCTATTGGGGTCGTTGAAAACGATATACCAATGGGCAGATATTTGCTTCCTTCAAATACAAATGC ATTAACCATCGTGCAGGAACTCTCGCCCTATTTGGTCATTTCGGTGGGCGATCACTATGAAGTTTTATTCAATCTTGAAA CCTACCAATGGGCTAATCTTGATGGCACGCCCATTCCCGTGACCGCCACGCCAACCAGCACCAAGTAG
Upstream 100 bases:
>100_bases ATCATTCTGCCTTTTGATGTTTCAGCTTCCTGTCATTGCCTACTCCAATGCTGGCGTGCTAGCATATCATTGAATTGGAA TGAGTTTGGAGAGATTGCAG
Downstream 100 bases:
>100_bases GGCTATTGGCTACTGGCTATAGGCTATCGGTAATGGTTTATGGCATTAACAGCGGTCATCGTTCCCTCACCCCCTAGCCC CCTCTCCCGCACGCGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKHYRIVVSFMVFGSLSVAACGRTSLPNTEPILRPQESRNQPITAVVVPTTTVDLTATILDQTAIVEGATKEAEYLAFEQ YLADKTATSLAELPSTAPPWPTYEPVTPSPTREYRLFAHLECTTDEPGPAIFVTNCWHGVINNKDFVVYGHGIRNKAANN KIVGGSIGVVENDIPMGRYLLPSNTNALTIVQELSPYLVISVGDHYEVLFNLETYQWANLDGTPIPVTATPTSTK
Sequences:
>Translated_235_residues MKHYRIVVSFMVFGSLSVAACGRTSLPNTEPILRPQESRNQPITAVVVPTTTVDLTATILDQTAIVEGATKEAEYLAFEQ YLADKTATSLAELPSTAPPWPTYEPVTPSPTREYRLFAHLECTTDEPGPAIFVTNCWHGVINNKDFVVYGHGIRNKAANN KIVGGSIGVVENDIPMGRYLLPSNTNALTIVQELSPYLVISVGDHYEVLFNLETYQWANLDGTPIPVTATPTSTK >Mature_235_residues MKHYRIVVSFMVFGSLSVAACGRTSLPNTEPILRPQESRNQPITAVVVPTTTVDLTATILDQTAIVEGATKEAEYLAFEQ YLADKTATSLAELPSTAPPWPTYEPVTPSPTREYRLFAHLECTTDEPGPAIFVTNCWHGVINNKDFVVYGHGIRNKAANN KIVGGSIGVVENDIPMGRYLLPSNTNALTIVQELSPYLVISVGDHYEVLFNLETYQWANLDGTPIPVTATPTSTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25695; Mature: 25695
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYRIVVSFMVFGSLSVAACGRTSLPNTEPILRPQESRNQPITAVVVPTTTVDLTATIL CCCEEEEEEEEHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEECCCEEEEEEEEC DQTAIVEGATKEAEYLAFEQYLADKTATSLAELPSTAPPWPTYEPVTPSPTREYRLFAHL CCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE ECTTDEPGPAIFVTNCWHGVINNKDFVVYGHGIRNKAANNKIVGGSIGVVENDIPMGRYL EECCCCCCCEEEEECCEECCCCCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCEEE LPSNTNALTIVQELSPYLVISVGDHYEVLFNLETYQWANLDGTPIPVTATPTSTK CCCCCCEEEEEECCCCEEEEEECCCEEEEEEECCEEECCCCCCCEEEECCCCCCC >Mature Secondary Structure MKHYRIVVSFMVFGSLSVAACGRTSLPNTEPILRPQESRNQPITAVVVPTTTVDLTATIL CCCEEEEEEEEHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEECCCEEEEEEEEC DQTAIVEGATKEAEYLAFEQYLADKTATSLAELPSTAPPWPTYEPVTPSPTREYRLFAHL CCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE ECTTDEPGPAIFVTNCWHGVINNKDFVVYGHGIRNKAANNKIVGGSIGVVENDIPMGRYL EECCCCCCCEEEEECCEECCCCCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCEEE LPSNTNALTIVQELSPYLVISVGDHYEVLFNLETYQWANLDGTPIPVTATPTSTK CCCCCCEEEEEECCCCEEEEEECCCEEEEEEECCEEECCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA