Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899590

Identifier: 159899590

GI number: 159899590

Start: 3877924

End: 3879168

Strand: Direct

Name: 159899590

Synonym: Haur_3071

Alternate gene names: NA

Gene position: 3877924-3879168 (Clockwise)

Preceding gene: 159899588

Following gene: 159899591

Centisome position: 61.1

GC content: 66.99

Gene sequence:

>1245_bases
ATGGGTTCACACAACGACCTCGGGTTGGTATACTGGGTGGTGACGAAACCAAACCCATCCCAAAACCGAGGTCGTATGCC
GAGTATACCAGCCCTTGCCCACTGGATCAACACCATCCTGCGCACCGCCGTGCCCACCCTCTCGCCCTGGACTGCCCGTC
GGCTCACCGATTGGCTCGTCAGCATCCTGCTCATGCCGTCCATCACCACGCGCGTCGTGGCCTGGGGCTGTGCCCTTGGA
CTGTCCACCGCTGCCCACGCCGCCAGTCACGAACGCCGACTGCGCCGCACCTATCGGGATTCCCAGCTGTCGTGGTCGCT
CCATCGCGCCATCCTCGCCACCACCCTCCACATCGCACCCACTGAATCCGTCACCGTTATCATCGATGAAACCACCCACA
CCGACCGCTGGACCCTGCTCACCGCCGCCCTCTGGTATCACGGTCGCGCCATTCCGCTTGCCTGGGTGCTCCATCCCGGC
TATACCCGCCGCGCCACCGCCTTCTGGACCGATGTTGCCACCCTGCTGGAGCGCGTGCAGCAGGTGCTGCCCAATGCCAT
GTCCGTCGTCGTCGTGGCCGACCGTGCTTTTGGCTGCCCCGCCTTCACCGATCAGGTCGCGGCCTACGGCTGGGGCTGGG
TCGTGCGCGTCCAAGGCCATACCCGCATCCAACTGCGGGGGCACACCGAAACCATGATCCGCACGCTGGTCACGCGAGGC
CATCGCGTGGTGCGGCGGGGCCATGCCTTCAAGAAGGCGGGCTGGCGAACGGTGACAGTGGTGGCCGCATGGGAGGCGAC
GTGTCACGAGCCGTTACTGCTGGTGAGCAATCTGGAGGGCATTGGGGCGATTCGGCAGGCGTATGGGCGGCGCTCTGCGA
TTGAGGCCCTGTTTCGCGATTGGAAAACGGCGGGCTGGCAATGGGAGGCGAGCCAGTCGCGGAGCCAGACGACGCAGGAG
GCCTTGGTGCTGGGCATGGCGATCGCGACGGTGCTGGTGCTGCTGGTCGGGACGGCGGAGGCGCAGGCGGTGCTGGCCGA
ACGCGGGGATCGCCCCAGCCCGCGCCGCCCATGGGCGGCACGAGAAAGTCTGTTTCGGTTGGGGCGGTATGGGGTGCTGC
GCTGGCTGTGGACGGGAACGCAGCCAGCGCTGGGAGCGCGACTATCGTTGGCGGGAACGGCGCTGCACGAACGGTGGGCC
ACGACGGTGACACGGGGTGGTCGGCTCGGGACGGCCATCCCCTAA

Upstream 100 bases:

>100_bases
TGAAGGGGCGAGGGAGCAGGGGTCAGAGGTAGGTTTAGCGTGCCCTCACCCCCGACCCCTCTCCCACTGCGGCGTTTAAG
GGCGGACAGGGACGCACACC

Downstream 100 bases:

>100_bases
CACTGATGAATACCCATTCCCCAACCTGTCCGCCCTTAAACACTGCGGCGGGAGAGGGGAGGTTCCCCCTCGCCTCGCAT
GCGGGCTAGGGGGTGAGGGA

Product: transposase IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGSHNDLGLVYWVVTKPNPSQNRGRMPSIPALAHWINTILRTAVPTLSPWTARRLTDWLVSILLMPSITTRVVAWGCALG
LSTAAHAASHERRLRRTYRDSQLSWSLHRAILATTLHIAPTESVTVIIDETTHTDRWTLLTAALWYHGRAIPLAWVLHPG
YTRRATAFWTDVATLLERVQQVLPNAMSVVVVADRAFGCPAFTDQVAAYGWGWVVRVQGHTRIQLRGHTETMIRTLVTRG
HRVVRRGHAFKKAGWRTVTVVAAWEATCHEPLLLVSNLEGIGAIRQAYGRRSAIEALFRDWKTAGWQWEASQSRSQTTQE
ALVLGMAIATVLVLLVGTAEAQAVLAERGDRPSPRRPWAARESLFRLGRYGVLRWLWTGTQPALGARLSLAGTALHERWA
TTVTRGGRLGTAIP

Sequences:

>Translated_414_residues
MGSHNDLGLVYWVVTKPNPSQNRGRMPSIPALAHWINTILRTAVPTLSPWTARRLTDWLVSILLMPSITTRVVAWGCALG
LSTAAHAASHERRLRRTYRDSQLSWSLHRAILATTLHIAPTESVTVIIDETTHTDRWTLLTAALWYHGRAIPLAWVLHPG
YTRRATAFWTDVATLLERVQQVLPNAMSVVVVADRAFGCPAFTDQVAAYGWGWVVRVQGHTRIQLRGHTETMIRTLVTRG
HRVVRRGHAFKKAGWRTVTVVAAWEATCHEPLLLVSNLEGIGAIRQAYGRRSAIEALFRDWKTAGWQWEASQSRSQTTQE
ALVLGMAIATVLVLLVGTAEAQAVLAERGDRPSPRRPWAARESLFRLGRYGVLRWLWTGTQPALGARLSLAGTALHERWA
TTVTRGGRLGTAIP
>Mature_413_residues
GSHNDLGLVYWVVTKPNPSQNRGRMPSIPALAHWINTILRTAVPTLSPWTARRLTDWLVSILLMPSITTRVVAWGCALGL
STAAHAASHERRLRRTYRDSQLSWSLHRAILATTLHIAPTESVTVIIDETTHTDRWTLLTAALWYHGRAIPLAWVLHPGY
TRRATAFWTDVATLLERVQQVLPNAMSVVVVADRAFGCPAFTDQVAAYGWGWVVRVQGHTRIQLRGHTETMIRTLVTRGH
RVVRRGHAFKKAGWRTVTVVAAWEATCHEPLLLVSNLEGIGAIRQAYGRRSAIEALFRDWKTAGWQWEASQSRSQTTQEA
LVLGMAIATVLVLLVGTAEAQAVLAERGDRPSPRRPWAARESLFRLGRYGVLRWLWTGTQPALGARLSLAGTALHERWAT
TVTRGGRLGTAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46091; Mature: 45960

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSHNDLGLVYWVVTKPNPSQNRGRMPSIPALAHWINTILRTAVPTLSPWTARRLTDWLV
CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SILLMPSITTRVVAWGCALGLSTAAHAASHERRLRRTYRDSQLSWSLHRAILATTLHIAP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECC
TESVTVIIDETTHTDRWTLLTAALWYHGRAIPLAWVLHPGYTRRATAFWTDVATLLERVQ
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QVLPNAMSVVVVADRAFGCPAFTDQVAAYGWGWVVRVQGHTRIQLRGHTETMIRTLVTRG
HHCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHH
HRVVRRGHAFKKAGWRTVTVVAAWEATCHEPLLLVSNLEGIGAIRQAYGRRSAIEALFRD
HHHHHHCCHHHHCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHH
WKTAGWQWEASQSRSQTTQEALVLGMAIATVLVLLVGTAEAQAVLAERGDRPSPRRPWAA
HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH
RESLFRLGRYGVLRWLWTGTQPALGARLSLAGTALHERWATTVTRGGRLGTAIP
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GSHNDLGLVYWVVTKPNPSQNRGRMPSIPALAHWINTILRTAVPTLSPWTARRLTDWLV
CCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SILLMPSITTRVVAWGCALGLSTAAHAASHERRLRRTYRDSQLSWSLHRAILATTLHIAP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECC
TESVTVIIDETTHTDRWTLLTAALWYHGRAIPLAWVLHPGYTRRATAFWTDVATLLERVQ
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QVLPNAMSVVVVADRAFGCPAFTDQVAAYGWGWVVRVQGHTRIQLRGHTETMIRTLVTRG
HHCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHH
HRVVRRGHAFKKAGWRTVTVVAAWEATCHEPLLLVSNLEGIGAIRQAYGRRSAIEALFRD
HHHHHHCCHHHHCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHH
WKTAGWQWEASQSRSQTTQEALVLGMAIATVLVLLVGTAEAQAVLAERGDRPSPRRPWAA
HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH
RESLFRLGRYGVLRWLWTGTQPALGARLSLAGTALHERWATTVTRGGRLGTAIP
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA