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The map label for this gene is yecD [C]

Identifier: 159899588

GI number: 159899588

Start: 3875013

End: 3875534

Strand: Direct

Name: yecD [C]

Synonym: Haur_3069

Alternate gene names: 159899588

Gene position: 3875013-3875534 (Clockwise)

Preceding gene: 159899587

Following gene: 159899590

Centisome position: 61.06

GC content: 49.81

Gene sequence:

>522_bases
ATGACACAAACTGCCTTAGTGTTGCTGGATGTTCAAGTCAATATGTTCGCACCCGAGGCAACGGTCTATGCTGGTGAACG
TGTGTTGGAAGCAATTGCCAGATTAATTCGTGCTGCGCGGGAGAATAACGCAGCGGTGGTGTATGTTCAGCATAATGGCG
GCCCCGATGATCCTGATGCACCAGGCAGCGCAGGTTGGCAATTGCATGAGGTTTGTAAGCTCCAAGCAGGCGATTTAGTT
GTGCAAAAAGAAACACCTAATGCCTTTTTGCACACCGATTTGGCCGAAATGCTGCGCCAGCGCGAGATCAAACAGCTAGT
TTTAGCGGGCTTTCAAACTGAATTGTGCATTGATACTACCTGTCGGGCAGCTTGGTCGCGCGGGTTTCGCGTCAGCCTTG
CCGCCGATGCTCATAGCACTTTCGATGGCGAAACCCTCAAAGCAGCCCAAATTATTGCCCACCATAATAGCGTGCTGCGC
AATTTCGCCAAAGTCTATTCAACCACCAACATTACATTTTAA

Upstream 100 bases:

>100_bases
CGGATGCATTACGCGGAGCGAATCGCAACATAGCTGCTGCCAACGATGCCGATTTTGAGGTGGGCTTCCGTTGTGCCGCT
GATGTACGCGAGGATTGGTA

Downstream 100 bases:

>100_bases
TCAGCAACGCCGATCGTTGGAAACCCAGCGATCGGCGTTTTTTATTTAATCCACGAAGAGCACGAAGAATTTTTTAGCCA
CGAATTGCACGAATGATTAT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTQTALVLLDVQVNMFAPEATVYAGERVLEAIARLIRAARENNAAVVYVQHNGGPDDPDAPGSAGWQLHEVCKLQAGDLV
VQKETPNAFLHTDLAEMLRQREIKQLVLAGFQTELCIDTTCRAAWSRGFRVSLAADAHSTFDGETLKAAQIIAHHNSVLR
NFAKVYSTTNITF

Sequences:

>Translated_173_residues
MTQTALVLLDVQVNMFAPEATVYAGERVLEAIARLIRAARENNAAVVYVQHNGGPDDPDAPGSAGWQLHEVCKLQAGDLV
VQKETPNAFLHTDLAEMLRQREIKQLVLAGFQTELCIDTTCRAAWSRGFRVSLAADAHSTFDGETLKAAQIIAHHNSVLR
NFAKVYSTTNITF
>Mature_172_residues
TQTALVLLDVQVNMFAPEATVYAGERVLEAIARLIRAARENNAAVVYVQHNGGPDDPDAPGSAGWQLHEVCKLQAGDLVV
QKETPNAFLHTDLAEMLRQREIKQLVLAGFQTELCIDTTCRAAWSRGFRVSLAADAHSTFDGETLKAAQIIAHHNSVLRN
FAKVYSTTNITF

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 18976; Mature: 18845

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTALVLLDVQVNMFAPEATVYAGERVLEAIARLIRAARENNAAVVYVQHNGGPDDPDA
CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
PGSAGWQLHEVCKLQAGDLVVQKETPNAFLHTDLAEMLRQREIKQLVLAGFQTELCIDTT
CCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CRAAWSRGFRVSLAADAHSTFDGETLKAAQIIAHHNSVLRNFAKVYSTTNITF
HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQTALVLLDVQVNMFAPEATVYAGERVLEAIARLIRAARENNAAVVYVQHNGGPDDPDA
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
PGSAGWQLHEVCKLQAGDLVVQKETPNAFLHTDLAEMLRQREIKQLVLAGFQTELCIDTT
CCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CRAAWSRGFRVSLAADAHSTFDGETLKAAQIIAHHNSVLRNFAKVYSTTNITF
HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA