Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899554
Identifier: 159899554
GI number: 159899554
Start: 3833186
End: 3834157
Strand: Direct
Name: 159899554
Synonym: Haur_3035
Alternate gene names: NA
Gene position: 3833186-3834157 (Clockwise)
Preceding gene: 159899553
Following gene: 159899555
Centisome position: 60.4
GC content: 45.78
Gene sequence:
>972_bases ATGGCTTTCAAACGTTTATTAATCCTGATCATAGTAGCGATCGGCTTTGGGCCAACTGCGAGTTTGGCCCAAACAGCCCC AAACCCACAACCAGAGCTAAAGACGATTCAACCAGTGGTAGAACAGCCAACCGGAGTCGAGGCACTGCCATTGGTTAAAT GGGATGCGATTGACGTGACAGTGGTAGAAGGTCAAGATGTATGGTTGGCGCTCCGCACTGACACACCAATCGAAACCACC AGTGGAATTAAAATTGATATTCAGCTCTACACCAGCAATGCTTCAAATGGAGCTGATATCAATGACGATTTTGAGAGCGA AATCACCCTGCCTCAAACCAATCAATCACGCAATAACCAGATAACCGGCTATATCACAGGGACTTCGCAAGTATTGTATA TTCAACTGCGCACCATTCCTGATACGATCATTGAGCCAAACGAAATCTTCTTTGTTGATGTGATTATCTCGAACGGGACT ATTGAGTCACGCGGCAACCGTGCCACCATCACGATCGCCAAAGACGAGAAATTCTACCCGGCCTTTGCCAATTGGCAAGG CTGCCAAGATGTCAATGAACCAGCCAATAATACCGCCGCTGGCAGTGGCATCTTAGCCATCTCGGGTGGCGCATGCACAA GTGATTTTGTTGGCGAAAATGCTGGTACTAGTAGTGCTGTTGACTATTATCGGCTCAGTTCAGCAACCAATGGAAACCTA AGTTTACGCCTAAAAAATACGACACCTGACCAACATAATTTCAATCTTTATCTATACAAATACAACCCAAGCACCACCCG CTATGATCTGGTTGCTCAATCAACCAATGATAATCAAGTGGATGATCTGATCAATCTTGCGATTGTAGCCAATACAAGTA ACGACAACGGGCTGTATCTGGCTGCCGCCTATTGGGCTACTTCAACTGGCGATAAAACTCCAACCTATGAATTAACTGCA ACAATGCAGTAG
Upstream 100 bases:
>100_bases AGCCAACGGCTGTGCCAACGTCACCAATTAATCCAAATGATCCACCAACACCACGTCCGTAAAAATAAATAGATAGGTAG ATTTACAAGGAGTTGTCTTA
Downstream 100 bases:
>100_bases GTTTAATGCCCTAAGCCCAAGCCCCTCGCCTGCCCAGCAGACGAGGGGCAATCCCAATCTGCTACGACAATGAGCAAGGG CAGGGGTGAGCGGCTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAFKRLLILIIVAIGFGPTASLAQTAPNPQPELKTIQPVVEQPTGVEALPLVKWDAIDVTVVEGQDVWLALRTDTPIETT SGIKIDIQLYTSNASNGADINDDFESEITLPQTNQSRNNQITGYITGTSQVLYIQLRTIPDTIIEPNEIFFVDVIISNGT IESRGNRATITIAKDEKFYPAFANWQGCQDVNEPANNTAAGSGILAISGGACTSDFVGENAGTSSAVDYYRLSSATNGNL SLRLKNTTPDQHNFNLYLYKYNPSTTRYDLVAQSTNDNQVDDLINLAIVANTSNDNGLYLAAAYWATSTGDKTPTYELTA TMQ
Sequences:
>Translated_323_residues MAFKRLLILIIVAIGFGPTASLAQTAPNPQPELKTIQPVVEQPTGVEALPLVKWDAIDVTVVEGQDVWLALRTDTPIETT SGIKIDIQLYTSNASNGADINDDFESEITLPQTNQSRNNQITGYITGTSQVLYIQLRTIPDTIIEPNEIFFVDVIISNGT IESRGNRATITIAKDEKFYPAFANWQGCQDVNEPANNTAAGSGILAISGGACTSDFVGENAGTSSAVDYYRLSSATNGNL SLRLKNTTPDQHNFNLYLYKYNPSTTRYDLVAQSTNDNQVDDLINLAIVANTSNDNGLYLAAAYWATSTGDKTPTYELTA TMQ >Mature_322_residues AFKRLLILIIVAIGFGPTASLAQTAPNPQPELKTIQPVVEQPTGVEALPLVKWDAIDVTVVEGQDVWLALRTDTPIETTS GIKIDIQLYTSNASNGADINDDFESEITLPQTNQSRNNQITGYITGTSQVLYIQLRTIPDTIIEPNEIFFVDVIISNGTI ESRGNRATITIAKDEKFYPAFANWQGCQDVNEPANNTAAGSGILAISGGACTSDFVGENAGTSSAVDYYRLSSATNGNLS LRLKNTTPDQHNFNLYLYKYNPSTTRYDLVAQSTNDNQVDDLINLAIVANTSNDNGLYLAAAYWATSTGDKTPTYELTAT MQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35048; Mature: 34917
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKRLLILIIVAIGFGPTASLAQTAPNPQPELKTIQPVVEQPTGVEALPLVKWDAIDVT CHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEEEE VVEGQDVWLALRTDTPIETTSGIKIDIQLYTSNASNGADINDDFESEITLPQTNQSRNNQ EEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCE ITGYITGTSQVLYIQLRTIPDTIIEPNEIFFVDVIISNGTIESRGNRATITIAKDEKFYP EEEEEECCCEEEEEEEEECCCHHCCCCCEEEEEEEEECCEEECCCCEEEEEEEECCCCCC AFANWQGCQDVNEPANNTAAGSGILAISGGACTSDFVGENAGTSSAVDYYRLSSATNGNL CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCCEE SLRLKNTTPDQHNFNLYLYKYNPSTTRYDLVAQSTNDNQVDDLINLAIVANTSNDNGLYL EEEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHCEEEEEEEEECCCCCCEEE AAAYWATSTGDKTPTYELTATMQ EEEEEECCCCCCCCEEEEEEEEC >Mature Secondary Structure AFKRLLILIIVAIGFGPTASLAQTAPNPQPELKTIQPVVEQPTGVEALPLVKWDAIDVT HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEEEE VVEGQDVWLALRTDTPIETTSGIKIDIQLYTSNASNGADINDDFESEITLPQTNQSRNNQ EEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCE ITGYITGTSQVLYIQLRTIPDTIIEPNEIFFVDVIISNGTIESRGNRATITIAKDEKFYP EEEEEECCCEEEEEEEEECCCHHCCCCCEEEEEEEEECCEEECCCCEEEEEEEECCCCCC AFANWQGCQDVNEPANNTAAGSGILAISGGACTSDFVGENAGTSSAVDYYRLSSATNGNL CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCCEE SLRLKNTTPDQHNFNLYLYKYNPSTTRYDLVAQSTNDNQVDDLINLAIVANTSNDNGLYL EEEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHCEEEEEEEEECCCCCCEEE AAAYWATSTGDKTPTYELTATMQ EEEEEECCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA