Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899553
Identifier: 159899553
GI number: 159899553
Start: 3831564
End: 3833147
Strand: Direct
Name: 159899553
Synonym: Haur_3034
Alternate gene names: NA
Gene position: 3831564-3833147 (Clockwise)
Preceding gene: 159899552
Following gene: 159899554
Centisome position: 60.37
GC content: 52.59
Gene sequence:
>1584_bases ATGAGTCAAGCTGCCAATCTGCCTAACCTCGTGGTCTATGGGCAAAGCGATGTTGGGCGACAACGGAATAATAACGAAGA TAATTTGGCATGGCGACATGCCGATGAACGTAGTGTTGGCACAAAATTGGTCAACGGGGTAACCGAACTTTTCGCCAAAA TTCGCGGCGGCGGGGCAACCGGGTTTAGTGTCAAAATCGACCATAAATTGCTGGCCAGCCACGGGCGGCTCTATGTCGTT GCCGATGGGGTCGGCGGTAATGATGATGGCGAGTTGGCCAGCCGCGCTGTTGTCGAATATACGACCAAGTTTTTCTATAA TAGCGATCCCAAAAACTATAAAAGCAAACAAGATCAACTGAATGCGGCAATTCAATATGCCACCAAAATGGTCTATAAAG AGGCCGGCAATACCAATCGCGCCTCAACCTTGGTGTTAGCTTTGGTCTGGGATGAAGGCACATTCCGCAAGATTATTTTC TCGAATGTTGGCGATAGCAAAGGCTATTTGTTCCGCGCCAATAATACCGAATATGATCGCGCCGTCCAAACCAAAGATCA TGTCAACGCCATGAACAAAAGCCTCTGGCAATCGATGGGCGACCCCGAGGTAACGCCTCACTTCAGCGATGAGCTAGTTT TGGGCAAAGATGATGTGATTGTACTCTGCTCAGACGGGCTTTCTGATGGGGTGCAGGCCGAGGAAATTGGCAAAATTGCC ACCCGCAATGCCCCACAAAATGCGACAACTGAGTTAATTAGCCTTGCTAATGAGCGCGGCGGCCACGATAATATCACCAA TGTGGTGGTACGCAACGGCCCTGCGCCCATTCAATGGGGAGCCTTAGGCGGGATTCTCGGCGTTGTGCTGTTGGTTGCTG CTCTTTTAGGCGGGATTGTCTTCATCGGCGGCGATGATGTTAACCGGACACAGGGTGGTCGCAACGCGATCATGATTCCA ACCCGACCAATCATCACCATGGTCGATGGTTCGTTTGCCACGGTTACTTTACCTGCTGAAACGGCAACAGCCGAAGCCGA ATTGATTCGGCAAGCAACCGAAAACCCAGTGCCAACCGATACTCTTGGGCCACAGGCAACCAGTGTGCCAGGCACAAACC CAACAGCACGGCCAGCCGCCACGGCAACCAACCGCCCAGCGGCCAATAATCCAACGCCAATTCCAGCAACCAACCCGCCA GCTGTTCAGCCAACCAATCCACCAGTGGTCATTCAACCAACCAATCCACCAGCCCCAGGCGATCGCGATGGCGATGGTGT AACTGATGACGTTGATCCATGTCCCGATGTGGCTGGACCAAACAATGGCTGTCCAGCGCCAGTTGAGCCAACCGCACCCC CAGCAGTTGTTGATACCGATGGCGATACGATTCCCGATAATGTTGATGATTGTCCAAATGAGCCTGGTGATCCGTCGCGG AATGGTTGTCCCAAGCCAGTTGAGCAGGCTACTAATACACCAAAACCGCCAACCGATACGCCACGGCCAACCGATACGCC TCAGCCAACGGCTGTGCCAACGTCACCAATTAATCCAAATGATCCACCAACACCACGTCCGTAA
Upstream 100 bases:
>100_bases GGTGATCGACGCAAATGGTTCAATGTACAACGTATCAACGGTGGAGAAACAGGATGGCTACCAGAAACAGTCTTACGCTA GGCCACCAAGGAGCATTGCA
Downstream 100 bases:
>100_bases AAATAAATAGATAGGTAGATTTACAAGGAGTTGTCTTAATGGCTTTCAAACGTTTATTAATCCTGATCATAGTAGCGATC GGCTTTGGGCCAACTGCGAG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; C Domain-Containing Protein; PASTA Domain-Containing Protein
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MSQAANLPNLVVYGQSDVGRQRNNNEDNLAWRHADERSVGTKLVNGVTELFAKIRGGGATGFSVKIDHKLLASHGRLYVV ADGVGGNDDGELASRAVVEYTTKFFYNSDPKNYKSKQDQLNAAIQYATKMVYKEAGNTNRASTLVLALVWDEGTFRKIIF SNVGDSKGYLFRANNTEYDRAVQTKDHVNAMNKSLWQSMGDPEVTPHFSDELVLGKDDVIVLCSDGLSDGVQAEEIGKIA TRNAPQNATTELISLANERGGHDNITNVVVRNGPAPIQWGALGGILGVVLLVAALLGGIVFIGGDDVNRTQGGRNAIMIP TRPIITMVDGSFATVTLPAETATAEAELIRQATENPVPTDTLGPQATSVPGTNPTARPAATATNRPAANNPTPIPATNPP AVQPTNPPVVIQPTNPPAPGDRDGDGVTDDVDPCPDVAGPNNGCPAPVEPTAPPAVVDTDGDTIPDNVDDCPNEPGDPSR NGCPKPVEQATNTPKPPTDTPRPTDTPQPTAVPTSPINPNDPPTPRP
Sequences:
>Translated_527_residues MSQAANLPNLVVYGQSDVGRQRNNNEDNLAWRHADERSVGTKLVNGVTELFAKIRGGGATGFSVKIDHKLLASHGRLYVV ADGVGGNDDGELASRAVVEYTTKFFYNSDPKNYKSKQDQLNAAIQYATKMVYKEAGNTNRASTLVLALVWDEGTFRKIIF SNVGDSKGYLFRANNTEYDRAVQTKDHVNAMNKSLWQSMGDPEVTPHFSDELVLGKDDVIVLCSDGLSDGVQAEEIGKIA TRNAPQNATTELISLANERGGHDNITNVVVRNGPAPIQWGALGGILGVVLLVAALLGGIVFIGGDDVNRTQGGRNAIMIP TRPIITMVDGSFATVTLPAETATAEAELIRQATENPVPTDTLGPQATSVPGTNPTARPAATATNRPAANNPTPIPATNPP AVQPTNPPVVIQPTNPPAPGDRDGDGVTDDVDPCPDVAGPNNGCPAPVEPTAPPAVVDTDGDTIPDNVDDCPNEPGDPSR NGCPKPVEQATNTPKPPTDTPRPTDTPQPTAVPTSPINPNDPPTPRP >Mature_526_residues SQAANLPNLVVYGQSDVGRQRNNNEDNLAWRHADERSVGTKLVNGVTELFAKIRGGGATGFSVKIDHKLLASHGRLYVVA DGVGGNDDGELASRAVVEYTTKFFYNSDPKNYKSKQDQLNAAIQYATKMVYKEAGNTNRASTLVLALVWDEGTFRKIIFS NVGDSKGYLFRANNTEYDRAVQTKDHVNAMNKSLWQSMGDPEVTPHFSDELVLGKDDVIVLCSDGLSDGVQAEEIGKIAT RNAPQNATTELISLANERGGHDNITNVVVRNGPAPIQWGALGGILGVVLLVAALLGGIVFIGGDDVNRTQGGRNAIMIPT RPIITMVDGSFATVTLPAETATAEAELIRQATENPVPTDTLGPQATSVPGTNPTARPAATATNRPAANNPTPIPATNPPA VQPTNPPVVIQPTNPPAPGDRDGDGVTDDVDPCPDVAGPNNGCPAPVEPTAPPAVVDTDGDTIPDNVDDCPNEPGDPSRN GCPKPVEQATNTPKPPTDTPRPTDTPQPTAVPTSPINPNDPPTPRP
Specific function: Unknown
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55537; Mature: 55406
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAANLPNLVVYGQSDVGRQRNNNEDNLAWRHADERSVGTKLVNGVTELFAKIRGGGAT CCCCCCCCCEEEECCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC GFSVKIDHKLLASHGRLYVVADGVGGNDDGELASRAVVEYTTKFFYNSDPKNYKSKQDQL CEEEEECHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NAAIQYATKMVYKEAGNTNRASTLVLALVWDEGTFRKIIFSNVGDSKGYLFRANNTEYDR HHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEHHHHCCCCCCCEEEECCCCCHHH AVQTKDHVNAMNKSLWQSMGDPEVTPHFSDELVLGKDDVIVLCSDGLSDGVQAEEIGKIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHH TRNAPQNATTELISLANERGGHDNITNVVVRNGPAPIQWGALGGILGVVLLVAALLGGIV HCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCEE FIGGDDVNRTQGGRNAIMIPTRPIITMVDGSFATVTLPAETATAEAELIRQATENPVPTD EECCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC TLGPQATSVPGTNPTARPAATATNRPAANNPTPIPATNPPAVQPTNPPVVIQPTNPPAPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC DRDGDGVTDDVDPCPDVAGPNNGCPAPVEPTAPPAVVDTDGDTIPDNVDDCPNEPGDPSR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCC NGCPKPVEQATNTPKPPTDTPRPTDTPQPTAVPTSPINPNDPPTPRP CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQAANLPNLVVYGQSDVGRQRNNNEDNLAWRHADERSVGTKLVNGVTELFAKIRGGGAT CCCCCCCCEEEECCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC GFSVKIDHKLLASHGRLYVVADGVGGNDDGELASRAVVEYTTKFFYNSDPKNYKSKQDQL CEEEEECHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NAAIQYATKMVYKEAGNTNRASTLVLALVWDEGTFRKIIFSNVGDSKGYLFRANNTEYDR HHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEHHHHCCCCCCCEEEECCCCCHHH AVQTKDHVNAMNKSLWQSMGDPEVTPHFSDELVLGKDDVIVLCSDGLSDGVQAEEIGKIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHH TRNAPQNATTELISLANERGGHDNITNVVVRNGPAPIQWGALGGILGVVLLVAALLGGIV HCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCEE FIGGDDVNRTQGGRNAIMIPTRPIITMVDGSFATVTLPAETATAEAELIRQATENPVPTD EECCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC TLGPQATSVPGTNPTARPAATATNRPAANNPTPIPATNPPAVQPTNPPVVIQPTNPPAPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC DRDGDGVTDDVDPCPDVAGPNNGCPAPVEPTAPPAVVDTDGDTIPDNVDDCPNEPGDPSR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCC NGCPKPVEQATNTPKPPTDTPRPTDTPQPTAVPTSPINPNDPPTPRP CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA