Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899555

Identifier: 159899555

GI number: 159899555

Start: 3834301

End: 3835155

Strand: Direct

Name: 159899555

Synonym: Haur_3036

Alternate gene names: NA

Gene position: 3834301-3835155 (Clockwise)

Preceding gene: 159899554

Following gene: 159899556

Centisome position: 60.42

GC content: 45.61

Gene sequence:

>855_bases
ATGCGCAGGCTCACTCAATTTGCTCTTTTTCTTGGATTAATTTGTTTGTTTTCTACTGCTAGTTATGCTAACCCCAATGT
GCCTACTGCCGCAACCCTCGCTTGGAGTAGCACCTTTGCTTCAACTGCCGAGGGCATTGATGTGTGGCTGCGGATTAATG
TGGTCGGGGCCGCACCAACCGATAATGTCAACCTGTCATTTATTTATCAAACTTTTGGGCAAACAGCACAAGCCTCTCAT
GACTATGAACAAACCGCTTGGCCAAATGGCACAAAAGGGACAATTACGGGCAATAAGCGGGTTGCTTATATCAAAATCAA
CATCAAAAGGAATGATTACTTTGAGCCAACCGAGACCTTCCAAGTTGAATTACGCTCAGATGCAGCCAACACTGTTATTA
CTGGGCCAGCCCGAGTAATGGTGACGATAAGCCGAGCACGGCTGATGAATCCAATCGCTGGTATTCTGGAATCATGTTTG
AATGGCGGCGAACCCAATAATGATTTTCCCGTATCGGCAGGCCAAATTGCCATAAATGGCGGTTGGTGCAACACTACCTT
TGATAAGGAAACGGTTAATGCCTTTGATTACTATCATTTGGTGCAATCGACCGCTGGGAGTATAACCATTCGGCTTGAAA
ACACCACCCCTGATCAACACGACATTGATCTTTATCTTTTCTATCGTGATGGTCAGGGCGATTACCAGAACTACCGCCAA
TCAATTAATGGCAATCAACAAGCTGAATATATTGAGGCTCCGCTTGCCGCCTATACCAATTATCTGATTGGCGTGCATTG
GGTCAGCGGTAGTGGCAGTAAAATTCCAACCTATCGCCTTAGCGTTTCTCGTTAA

Upstream 100 bases:

>100_bases
AGGGGCAATCCCAATCTGCTACGACAATGAGCAAGGGCAGGGGTGAGCGGCTAAAGCAGCTAGTTTTACCAACCATCAAT
GGCAGGGAGGATCATCAGGT

Downstream 100 bases:

>100_bases
GCTCATTTGGCATTGGCAGCTCAGTTGTGGCCTAGTCATTGAGCGGCTCACATCAGCATAATTCAGATTGGGTTAGGCAG
TTATCCAATCAACCAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRRLTQFALFLGLICLFSTASYANPNVPTAATLAWSSTFASTAEGIDVWLRINVVGAAPTDNVNLSFIYQTFGQTAQASH
DYEQTAWPNGTKGTITGNKRVAYIKINIKRNDYFEPTETFQVELRSDAANTVITGPARVMVTISRARLMNPIAGILESCL
NGGEPNNDFPVSAGQIAINGGWCNTTFDKETVNAFDYYHLVQSTAGSITIRLENTTPDQHDIDLYLFYRDGQGDYQNYRQ
SINGNQQAEYIEAPLAAYTNYLIGVHWVSGSGSKIPTYRLSVSR

Sequences:

>Translated_284_residues
MRRLTQFALFLGLICLFSTASYANPNVPTAATLAWSSTFASTAEGIDVWLRINVVGAAPTDNVNLSFIYQTFGQTAQASH
DYEQTAWPNGTKGTITGNKRVAYIKINIKRNDYFEPTETFQVELRSDAANTVITGPARVMVTISRARLMNPIAGILESCL
NGGEPNNDFPVSAGQIAINGGWCNTTFDKETVNAFDYYHLVQSTAGSITIRLENTTPDQHDIDLYLFYRDGQGDYQNYRQ
SINGNQQAEYIEAPLAAYTNYLIGVHWVSGSGSKIPTYRLSVSR
>Mature_284_residues
MRRLTQFALFLGLICLFSTASYANPNVPTAATLAWSSTFASTAEGIDVWLRINVVGAAPTDNVNLSFIYQTFGQTAQASH
DYEQTAWPNGTKGTITGNKRVAYIKINIKRNDYFEPTETFQVELRSDAANTVITGPARVMVTISRARLMNPIAGILESCL
NGGEPNNDFPVSAGQIAINGGWCNTTFDKETVNAFDYYHLVQSTAGSITIRLENTTPDQHDIDLYLFYRDGQGDYQNYRQ
SINGNQQAEYIEAPLAAYTNYLIGVHWVSGSGSKIPTYRLSVSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31370; Mature: 31370

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTQFALFLGLICLFSTASYANPNVPTAATLAWSSTFASTAEGIDVWLRINVVGAAPT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEEEEEEEECCCC
DNVNLSFIYQTFGQTAQASHDYEQTAWPNGTKGTITGNKRVAYIKINIKRNDYFEPTETF
CCCEEEEEEEHHCCHHCCCCCCHHHCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCEE
QVELRSDAANTVITGPARVMVTISRARLMNPIAGILESCLNGGEPNNDFPVSAGQIAING
EEEEECCCCCEEEECCCEEEEEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
GWCNTTFDKETVNAFDYYHLVQSTAGSITIRLENTTPDQHDIDLYLFYRDGQGDYQNYRQ
CEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHH
SINGNQQAEYIEAPLAAYTNYLIGVHWVSGSGSKIPTYRLSVSR
HCCCCCCHHHHHCCHHHHCCEEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MRRLTQFALFLGLICLFSTASYANPNVPTAATLAWSSTFASTAEGIDVWLRINVVGAAPT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEEEEEEEECCCC
DNVNLSFIYQTFGQTAQASHDYEQTAWPNGTKGTITGNKRVAYIKINIKRNDYFEPTETF
CCCEEEEEEEHHCCHHCCCCCCHHHCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCEE
QVELRSDAANTVITGPARVMVTISRARLMNPIAGILESCLNGGEPNNDFPVSAGQIAING
EEEEECCCCCEEEECCCEEEEEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
GWCNTTFDKETVNAFDYYHLVQSTAGSITIRLENTTPDQHDIDLYLFYRDGQGDYQNYRQ
CEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHH
SINGNQQAEYIEAPLAAYTNYLIGVHWVSGSGSKIPTYRLSVSR
HCCCCCCHHHHHCCHHHHCCEEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA