Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is mutL [H]
Identifier: 159899518
GI number: 159899518
Start: 3787657
End: 3789552
Strand: Direct
Name: mutL [H]
Synonym: Haur_2999
Alternate gene names: 159899518
Gene position: 3787657-3789552 (Clockwise)
Preceding gene: 159899517
Following gene: 159899526
Centisome position: 59.68
GC content: 53.06
Gene sequence:
>1896_bases ATGCCAATTCGTGTTTTAGACCCAACTTTAGCTGCCCAAATCGCCGCTGGCGAGGTGGTTGAACGCCCAGCCTCGGTCGT CAAAGAATTAATCGAAAATTCGGTCGATGCTGGCGCTACCGAGATTCGGGTCGAGGCACGCGAGGGCGGCAAACGCGAGT TGCGCATCCAAGATAATGGCTGTGGCATTGCCAGCGATGAGGTTGAAACGGCATTTTTGCGCCATGCCACCAGTAAAGTA ACCGAAATTGAAGACCTATTTTCGATTCGCACACTGGGTTTTCGTGGCGAAGCCTTGCCTTCCATTGCCTCAGTTGCTCA AGTAACATGCCTTACCCGCACTGCCGCCGATGAAGTTGGTACTGAATTGCGGATCGCTGGTGGCGAAATTCAGGCTAAAA CGCCGCGTGGCTGCTCGGTCGGCACAACCTTCACGATTCGCAATTTGTTTTATAACACCCCAGCACGGCTCAAATTTATG CGCTCCGATGCCACCGAAATGAGCCAAATTAGCACAATCGTGACCCAATATGCCTTGGCCTACCCCAACATTCGCTGGAC CTTGCTGCTCGATGGCAAGCTGGCCTTACAAACCCCAGGCAATGGGCGTTTGCTCGATGCCTTGATTGAATTGTATGGGA TTGATGTTGGCCGCGAGATGATCAGCGTTGATCGGACCTCGGAAGCCGAAGATGAAACTGTGCGCGTTCATGGCTTTGTC AGCCAACCTTCGACCTTTCGCGCTGCCCGTTCGTATATGCACTTATTCGTCAATCAGCGTTGGATCAAGCCGCAAGGCAA TTTGGTCTATATGATCGAAGAGGCCTACCATACCTTATTGATGAAGGGTCGGCATCCGATTGTGGCCTTGAATATTGAGC TTGAGCCAGAAGCGGTTGATGTGAATGTGCACCCAACCAAGAGCGAGGTCAAATTTCGCAATCAATCGCATGTCTATGGC GCATTGACCAAAGCAGTACGCGAAGCCTTGGCTGCTCAAAGCACTATTCGGGCTTGGACAGGCTTTGGAGCCAACGAAAG TGTCAATCGGCGGGTCGAATTACGCTCGCCCAATGGCGAACGACGTGGCTCAAGCAATGATGCACCCTTGTTTGATGATG CACCAGCAGCGCCACGCCCTCAGGTCAATAATTATCCTGATGACGATTTTGATTCGACCGTGAATTTGCCGCCAATTGCT AAACAAGCGCGGTTTGAAACCCCAACCACCAGCCAAACCAGCAGTTTCTTGCCGCCGCAGCAACAAGCTTTTGATCCGGC GTATGCACCGAGCATGCCAGCTCCAGGCGAGGCCAAATTGCCGATGTTACGGGTGGTTGGCCAAGTTAACGAAACCTATA TTGTGGCCGAAAGCAGCGATGGTATGTATTTGGTCGATCAGCATGCGGCCCACGAACGGGTGGTGTATGAGCGCTTGATG GCCGAACATCAGGATGTGCCAATTGAACGCCAAACCCTGATGTTAGCCCAACCGATTGAACTACCACCAGCCGTCACCCG TTTGCTCAGCGCTCACTTGGCCGATTTGGAGCAATGGGGCTTTGAGGCCGAGGAATTTGGCGAAGGCACATTAATGTTGC GAGCTGTGCCAAGTGGCTTGCACGTTGGCCAAATTGCCACCGCCTTGATGGAAATCGCTGATCATTTGAGTTATGAAGGC GGGGCCACTAGCGACGATCGGCGTGAAAAAATGTTGACCACGATCGCCTGCCATAGCTCAATTCGCGCGGGCAAAACCCT GACCCACGAAGAGATGCGCCAGCTTTTGCAACAACTTGAGCGCTGCGAAATGCCGCGCACCTGCCCGCATGGCCGCCCAA CCATGCTCCAAATTACGCAAGGCCAAATCGAACGCCAATTTGGGCGCAAAGGCTAG
Upstream 100 bases:
>100_bases GTGCTCCCGATCTCCATCCCAAACTAGCTCATTTATGCTAAAAAGCCCAATTTATGCTACAATAGCAGGGCAGAATGTGT ATCTACGAGGAGCCTGAGCA
Downstream 100 bases:
>100_bases GGATCAGGGATCGGTTGTTAGGGGCTGGGGATCAGGATTTAACACAGAGGCACAGAGACGATTTAAGGGTTAGGGGCCAG CGATCAGGACTCAGGATTGA
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MPIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNGCGIASDEVETAFLRHATSKV TEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVGTELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFM RSDATEMSQISTIVTQYALAYPNIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFV SQPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVDVNVHPTKSEVKFRNQSHVYG ALTKAVREALAAQSTIRAWTGFGANESVNRRVELRSPNGERRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIA KQARFETPTTSQTSSFLPPQQQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLM AEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVPSGLHVGQIATALMEIADHLSYEG GATSDDRREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLERCEMPRTCPHGRPTMLQITQGQIERQFGRKG
Sequences:
>Translated_631_residues MPIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNGCGIASDEVETAFLRHATSKV TEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVGTELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFM RSDATEMSQISTIVTQYALAYPNIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFV SQPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVDVNVHPTKSEVKFRNQSHVYG ALTKAVREALAAQSTIRAWTGFGANESVNRRVELRSPNGERRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIA KQARFETPTTSQTSSFLPPQQQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLM AEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVPSGLHVGQIATALMEIADHLSYEG GATSDDRREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLERCEMPRTCPHGRPTMLQITQGQIERQFGRKG >Mature_630_residues PIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNGCGIASDEVETAFLRHATSKVT EIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVGTELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFMR SDATEMSQISTIVTQYALAYPNIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFVS QPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVDVNVHPTKSEVKFRNQSHVYGA LTKAVREALAAQSTIRAWTGFGANESVNRRVELRSPNGERRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIAK QARFETPTTSQTSSFLPPQQQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLMA EHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVPSGLHVGQIATALMEIADHLSYEGG ATSDDRREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLERCEMPRTCPHGRPTMLQITQGQIERQFGRKG
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=343, Percent_Identity=35.2769679300292, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI310128478, Length=349, Percent_Identity=30.945558739255, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI4505913, Length=349, Percent_Identity=30.945558739255, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4505911, Length=323, Percent_Identity=31.5789473684211, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI189458898, Length=323, Percent_Identity=31.5789473684211, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=29.746835443038, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI310128480, Length=314, Percent_Identity=28.6624203821656, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI263191589, Length=249, Percent_Identity=29.3172690763052, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI91992162, Length=403, Percent_Identity=23.5732009925558, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI91992160, Length=403, Percent_Identity=23.5732009925558, Blast_Score=102, Evalue=9e-22, Organism=Escherichia coli, GI1790612, Length=338, Percent_Identity=40.8284023668639, Blast_Score=228, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=32.1875, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17562796, Length=364, Percent_Identity=28.5714285714286, Blast_Score=144, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323819, Length=345, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=336, Percent_Identity=29.4642857142857, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323063, Length=210, Percent_Identity=29.5238095238095, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI17136968, Length=618, Percent_Identity=29.2880258899676, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI17136970, Length=358, Percent_Identity=26.8156424581006, Blast_Score=135, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 69787; Mature: 69656
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNG CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCC CGIASDEVETAFLRHATSKVTEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFMRSDATEMSQISTIVTQYALA CEEEEECCEEEECCCCCCCCCCEEEEHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHH YPNIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFV CCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCHHCHHHHHCCCCCCCCCCEEEEEEEC SQPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVD CCCHHHHHHHHHHHHHHHCEEECCCCCEEEEEHHHHHHHHHCCCCCEEEEEEEECCCEEE VNVHPTKSEVKFRNQSHVYGALTKAVREALAAQSTIRAWTGFGANESVNRRVELRSPNGE EEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC RRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIAKQARFETPTTSQTSSFLPPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCH QQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLM HHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHH AEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVPSGL HHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCC HVGQIATALMEIADHLSYEGGATSDDRREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLE CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RCEMPRTCPHGRPTMLQITQGQIERQFGRKG HCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC >Mature Secondary Structure PIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNG CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCC CGIASDEVETAFLRHATSKVTEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFMRSDATEMSQISTIVTQYALA CEEEEECCEEEECCCCCCCCCCEEEEHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHH YPNIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFV CCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCHHCHHHHHCCCCCCCCCCEEEEEEEC SQPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVD CCCHHHHHHHHHHHHHHHCEEECCCCCEEEEEHHHHHHHHHCCCCCEEEEEEEECCCEEE VNVHPTKSEVKFRNQSHVYGALTKAVREALAAQSTIRAWTGFGANESVNRRVELRSPNGE EEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC RRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIAKQARFETPTTSQTSSFLPPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCH QQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLM HHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHH AEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVPSGL HHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCC HVGQIATALMEIADHLSYEGGATSDDRREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLE CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RCEMPRTCPHGRPTMLQITQGQIERQFGRKG HCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA