Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899454
Identifier: 159899454
GI number: 159899454
Start: 3710278
End: 3711303
Strand: Direct
Name: 159899454
Synonym: Haur_2935
Alternate gene names: NA
Gene position: 3710278-3711303 (Clockwise)
Preceding gene: 159899452
Following gene: 159899456
Centisome position: 58.46
GC content: 49.9
Gene sequence:
>1026_bases ATGCATTTGAAGAAATGGTCGTTGATTGGAGCTGCATTGGTTGGTTTATTGCTCGCTCAGCCAATTACCCCAAGCACAGC TAGCCCACAAGCTTTGGATATCGCTACTAGAGGATCGATTAGTTGTGCCAGCCCGACGACTGATCGAATCGATTGCTTTG TGGTGGGCGATGATAAACAAGTTTGGCAACATTCATGGCAAAGCGGTTTTGGTTGGGGCACTTGGGTTGGTTTGGGCTTT CCCTATTTCACAATCGATCCAGGCGGGGGTGTTTCGGCGGTTGCGCGTGATGGCACGACCATTGATATTTTTGTGAGTGG CAAGGATGGTAATTTTTTCAATCTATACCAACGCACCTGGAATGGCACAACTTGGAGCGATTGGACGAGCTTAGGCGGGC CAGGCTCGTGGGATATTTACGAATTGAGCTGTACCTCAGCTTCGGCGACCAACATTAGCTGTTTTGTGCGAGCGAGCGAC AACCACCTTTGGCAAAAAACCTGGAATGGCAGCAATTGGTCAACGTGGAGCGATCTTGGCACATTTGTTAATGGCGGCCC ATTTAAAGGTCTCGCTTCAAGTAATTATAACGCTGATAGTATTCTGCTTTTTGCAATCGGCAGTGATGGTCATGCCTATC GTCGTTTTTACGAAAGCGGCACATGGAGTGGCTGGCTCGATGATGGCGGGCCAACTGGCAGTAGCTTCGATCAAGTAAAT TGCCAGGATCAAGCAGGCAGCAAGATCACATGTGCCTTTACTGATACCATGGGGGACGTTTGGTATCGCACATGGGATGC AGGTTGGAGCGCATTCACGCAGCTAGCAACCCCGCCATCAAGTGCTAAGGGGGTTGCGGTAGCCCATTATTCTAGCTTGG GAAGGGTGATCGTTACCAATGGCTTTGATGGTAGGCTTTATCGAACATTTCAGCCAGACCCAACCAGCGCTTGGGCTAGT TGGCTCGACGATGGTCGCCCGCAAGATCTTCAAATCTTTCTGCCAATGGCGATAAAGCCCAACTAA
Upstream 100 bases:
>100_bases TGGAATTACAGCTATTTGACAATTTTTGTCATATTGTGTCAATACCCAATCGACTAGGCTTACCACTATACAGGTTGATA GCGGTTACAGGAGGAATATC
Downstream 100 bases:
>100_bases GCCTTGAGCAAAGCAAAATGGCGCATATCGGCAACTTGTTGCTTGTTGCGTTTGAATAATTCTTGATTGTAGCCCACAAT CAAAGCCAAAGCGCTAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MHLKKWSLIGAALVGLLLAQPITPSTASPQALDIATRGSISCASPTTDRIDCFVVGDDKQVWQHSWQSGFGWGTWVGLGF PYFTIDPGGGVSAVARDGTTIDIFVSGKDGNFFNLYQRTWNGTTWSDWTSLGGPGSWDIYELSCTSASATNISCFVRASD NHLWQKTWNGSNWSTWSDLGTFVNGGPFKGLASSNYNADSILLFAIGSDGHAYRRFYESGTWSGWLDDGGPTGSSFDQVN CQDQAGSKITCAFTDTMGDVWYRTWDAGWSAFTQLATPPSSAKGVAVAHYSSLGRVIVTNGFDGRLYRTFQPDPTSAWAS WLDDGRPQDLQIFLPMAIKPN
Sequences:
>Translated_341_residues MHLKKWSLIGAALVGLLLAQPITPSTASPQALDIATRGSISCASPTTDRIDCFVVGDDKQVWQHSWQSGFGWGTWVGLGF PYFTIDPGGGVSAVARDGTTIDIFVSGKDGNFFNLYQRTWNGTTWSDWTSLGGPGSWDIYELSCTSASATNISCFVRASD NHLWQKTWNGSNWSTWSDLGTFVNGGPFKGLASSNYNADSILLFAIGSDGHAYRRFYESGTWSGWLDDGGPTGSSFDQVN CQDQAGSKITCAFTDTMGDVWYRTWDAGWSAFTQLATPPSSAKGVAVAHYSSLGRVIVTNGFDGRLYRTFQPDPTSAWAS WLDDGRPQDLQIFLPMAIKPN >Mature_341_residues MHLKKWSLIGAALVGLLLAQPITPSTASPQALDIATRGSISCASPTTDRIDCFVVGDDKQVWQHSWQSGFGWGTWVGLGF PYFTIDPGGGVSAVARDGTTIDIFVSGKDGNFFNLYQRTWNGTTWSDWTSLGGPGSWDIYELSCTSASATNISCFVRASD NHLWQKTWNGSNWSTWSDLGTFVNGGPFKGLASSNYNADSILLFAIGSDGHAYRRFYESGTWSGWLDDGGPTGSSFDQVN CQDQAGSKITCAFTDTMGDVWYRTWDAGWSAFTQLATPPSSAKGVAVAHYSSLGRVIVTNGFDGRLYRTFQPDPTSAWAS WLDDGRPQDLQIFLPMAIKPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.18
Molecular weight: Translated: 37080; Mature: 37080
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKKWSLIGAALVGLLLAQPITPSTASPQALDIATRGSISCASPTTDRIDCFVVGDDKQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCHH VWQHSWQSGFGWGTWVGLGFPYFTIDPGGGVSAVARDGTTIDIFVSGKDGNFFNLYQRTW HHHHHHHCCCCEEEHHHCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEC NGTTWSDWTSLGGPGSWDIYELSCTSASATNISCFVRASDNHLWQKTWNGSNWSTWSDLG CCCCCCCHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH TFVNGGPFKGLASSNYNADSILLFAIGSDGHAYRRFYESGTWSGWLDDGGPTGSSFDQVN HHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCC CQDQAGSKITCAFTDTMGDVWYRTWDAGWSAFTQLATPPSSAKGVAVAHYSSLGRVIVTN CHHCCCCEEEEEEECCCCCCEEEEHHCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEC GFDGRLYRTFQPDPTSAWASWLDDGRPQDLQIFLPMAIKPN CCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEEECCC >Mature Secondary Structure MHLKKWSLIGAALVGLLLAQPITPSTASPQALDIATRGSISCASPTTDRIDCFVVGDDKQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCHH VWQHSWQSGFGWGTWVGLGFPYFTIDPGGGVSAVARDGTTIDIFVSGKDGNFFNLYQRTW HHHHHHHCCCCEEEHHHCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEC NGTTWSDWTSLGGPGSWDIYELSCTSASATNISCFVRASDNHLWQKTWNGSNWSTWSDLG CCCCCCCHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH TFVNGGPFKGLASSNYNADSILLFAIGSDGHAYRRFYESGTWSGWLDDGGPTGSSFDQVN HHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCC CQDQAGSKITCAFTDTMGDVWYRTWDAGWSAFTQLATPPSSAKGVAVAHYSSLGRVIVTN CHHCCCCEEEEEEECCCCCCEEEEHHCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEC GFDGRLYRTFQPDPTSAWASWLDDGRPQDLQIFLPMAIKPN CCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA