Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899427
Identifier: 159899427
GI number: 159899427
Start: 3678972
End: 3679763
Strand: Direct
Name: 159899427
Synonym: Haur_2908
Alternate gene names: NA
Gene position: 3678972-3679763 (Clockwise)
Preceding gene: 159899426
Following gene: 159899431
Centisome position: 57.97
GC content: 49.75
Gene sequence:
>792_bases ATGGTGTTCTTTGGGATCGTCTTGCTGATCGCGGCTGTTATCTGCTTCTTTTTCGCTCGCAGTCAATCCAATAAATTGGC CGATCTGAATGCTACCGACACCTATACAACCCAAATGTTGCATGATTTGCACAAAAAAGTTGTGGAAACGCTCGGGGCCG AGGCGCTGGCCGAACCCTGCGAAATTGAAGGCCAAGTTAGCTGCGATAATCCATTGGTCGCCCCGATTTCTGGTCAAACC TGTATTGCCTACCGTTTTTCGTTAACTCGCGAATATAGCGAAGTTGTGCATGACACCGATAGCGAAGGTCGCAAACGTAC CCGTACCCAAACTGGCAGTGAAACGATTAAATCTGAGGAAGAGTGCGCCTATTTCTGGATCAACGATAATTTTGGTAAGG TCTGGGTTGACCCAACTGATGCCGAGATTGAGTATGAGGCGGGCCAAAATATTCTGCTGCCTTCGCCAGATAAGGCTTCA ATTTTGCATTTTGGCGATTTTGAATTTGCCGCCCCAGCCTCAAACAAGGGTGCTCGCCGCACCACTGGCTATCGGGCGCA AGAAGAGCTTTTTACCGACGATGGGCGAGCCTACATTCTTGGTTGTGTGACTGATGACGAGGGTGAGCCAACCATCGCCT ACCATGAAAAGAAGCTTGATCGCATGCTGGTTAGCCGCAAAACTGAACGCGAATTGGCTAACAGCGCGGCTGGTTGGTCA CGCAATCTCTATTATGGCGCTGCTGGCTCAGCCGTAGCTGGTATCATCTTCACGATTTGGGGTTTGTTGTAA
Upstream 100 bases:
>100_bases AGCCATCGCCACAAAAGTGCTAGCAGAGTGTCATTGCCAAGCGTGCTGATGACCTTTATACTCAGTTTATCCCCGTCTAG CCTTTGGGAGGATCGCTGAT
Downstream 100 bases:
>100_bases TAACCCTATTTTAAGCTTCCATACACCCGTAAAATCGGATCGATTGCGCTGAGGTGGCTCAAAGCCCAAGCCAAACTGGC AGCCTGAACTGCCTCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS RNLYYGAAGSAVAGIIFTIWGLL
Sequences:
>Translated_263_residues MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS RNLYYGAAGSAVAGIIFTIWGLL >Mature_263_residues MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS RNLYYGAAGSAVAGIIFTIWGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29179; Mature: 29179
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPC CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC EIEGQVSCDNPLVAPISGQTCIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEE CCCCEEECCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC ECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKASILHFGDFEFAAPASNKGARR CEEEEEEECCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEECCCCEECCCCCCCCCC TTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS CCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC RNLYYGAAGSAVAGIIFTIWGLL CCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPC CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC EIEGQVSCDNPLVAPISGQTCIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEE CCCCEEECCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC ECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKASILHFGDFEFAAPASNKGARR CEEEEEEECCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEECCCCEECCCCCCCCCC TTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS CCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC RNLYYGAAGSAVAGIIFTIWGLL CCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA