Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899329
Identifier: 159899329
GI number: 159899329
Start: 3571629
End: 3572561
Strand: Direct
Name: 159899329
Synonym: Haur_2810
Alternate gene names: NA
Gene position: 3571629-3572561 (Clockwise)
Preceding gene: 159899328
Following gene: 159899330
Centisome position: 56.28
GC content: 49.62
Gene sequence:
>933_bases ATGCAAACACTCCTTTGGTGGATTTACTGGCCACTTAGTTGGCTATTGATTGTCGCCAGCGCTTGGTATCTGCCCAATCG CTGGCGAAACAGCGTCGGTTGGAGCATATTGGGGTTCGGAGGAGCACTCAGCTTATATCTAGCAATCGATTTAGACCCTT GGCAACGCTTGCTCACCAGCACAGCCGGATTAATTCTCTTGCTCAAAGCTGTCGTACTTTTGCAAATTCCCCGTCAAGAA CTGCAACGGTATTCGCATGTTGGTTTAGGCTTGTTTATGACGATCTGGCCAGGCATGAATCCAGCCCCTTTTCGCCAACG CCGCCAGATTCAACGCGATCTTGGCCCGACAATTATTCAAGGTTGGGTTGGAGTTATGGCTGGCAGTTGTGGTTTGATTC TCAGTGCTTATCTCTTGCCATGGCTTGGCCAAGCATGGGCAAGTTGGGCAGCAATTCTCAGTATTTTAGGGATTGTGCAC TTTGGTTTAGCCTATTGGCTCAATGCCGGGTTATGGTATTGGGGTTGGCCAGTGGCCGCCTTATTTCGGCAGCCCCTCCA AAGCCGCTCCTTACGCGATTTTTGGAGTGTGCGGTGGAACATTGCGTTTGTTGAGATGAACAAACAACTTTTTTTACGCC GCTTAGGCCGCTACGGCCCAAGTACGCTCGTGATAGGAATCTTTCTACTGTCAGGGATATTCCACGAACTTGGTTTAAGC TATCCGGCACAAGCAGGTTGGGGTCAAGCAATGGCCTACTTTGGGTTGCATGCTGGGCTAATGTGGCTTGAGCGAACGTT TAATTTAGCTCAACGCTGGCCACAATGGATCTTAAGTTGTTGGACATGGCTAGCCATCCTTGGGCCTTTGTCATGGTTGT TTCATCAACAATTTCGCCAAGCGCTGATTGTACCTGCCCTACATTGGGCCTAA
Upstream 100 bases:
>100_bases CTGCATTCCGCCCCAAAACCGCATAATTAATCCTGTAACAACTGCGTAACATCGCGGCGCTATGCTCAAAATATATCATT TTGAAGCAAACGAGGCCGCA
Downstream 100 bases:
>100_bases GCACTATTGCATAGTCAGCCGCTTGATTGGTATTTTGGCTGGGGCATCAGTTTGGCAGCTTTGGCTCATGGCATAATTTT GCTGGCGAGTTCTCAAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MQTLLWWIYWPLSWLLIVASAWYLPNRWRNSVGWSILGFGGALSLYLAIDLDPWQRLLTSTAGLILLLKAVVLLQIPRQE LQRYSHVGLGLFMTIWPGMNPAPFRQRRQIQRDLGPTIIQGWVGVMAGSCGLILSAYLLPWLGQAWASWAAILSILGIVH FGLAYWLNAGLWYWGWPVAALFRQPLQSRSLRDFWSVRWNIAFVEMNKQLFLRRLGRYGPSTLVIGIFLLSGIFHELGLS YPAQAGWGQAMAYFGLHAGLMWLERTFNLAQRWPQWILSCWTWLAILGPLSWLFHQQFRQALIVPALHWA
Sequences:
>Translated_310_residues MQTLLWWIYWPLSWLLIVASAWYLPNRWRNSVGWSILGFGGALSLYLAIDLDPWQRLLTSTAGLILLLKAVVLLQIPRQE LQRYSHVGLGLFMTIWPGMNPAPFRQRRQIQRDLGPTIIQGWVGVMAGSCGLILSAYLLPWLGQAWASWAAILSILGIVH FGLAYWLNAGLWYWGWPVAALFRQPLQSRSLRDFWSVRWNIAFVEMNKQLFLRRLGRYGPSTLVIGIFLLSGIFHELGLS YPAQAGWGQAMAYFGLHAGLMWLERTFNLAQRWPQWILSCWTWLAILGPLSWLFHQQFRQALIVPALHWA >Mature_310_residues MQTLLWWIYWPLSWLLIVASAWYLPNRWRNSVGWSILGFGGALSLYLAIDLDPWQRLLTSTAGLILLLKAVVLLQIPRQE LQRYSHVGLGLFMTIWPGMNPAPFRQRRQIQRDLGPTIIQGWVGVMAGSCGLILSAYLLPWLGQAWASWAAILSILGIVH FGLAYWLNAGLWYWGWPVAALFRQPLQSRSLRDFWSVRWNIAFVEMNKQLFLRRLGRYGPSTLVIGIFLLSGIFHELGLS YPAQAGWGQAMAYFGLHAGLMWLERTFNLAQRWPQWILSCWTWLAILGPLSWLFHQQFRQALIVPALHWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35742; Mature: 35742
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLLWWIYWPLSWLLIVASAWYLPNRWRNSVGWSILGFGGALSLYLAIDLDPWQRLLTS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCEEEHEEEECCHHHHHHHH TAGLILLLKAVVLLQIPRQELQRYSHVGLGLFMTIWPGMNPAPFRQRRQIQRDLGPTIIQ HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHH GWVGVMAGSCGLILSAYLLPWLGQAWASWAAILSILGIVHFGLAYWLNAGLWYWGWPVAA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFRQPLQSRSLRDFWSVRWNIAFVEMNKQLFLRRLGRYGPSTLVIGIFLLSGIFHELGLS HHHHHHHHCHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC YPAQAGWGQAMAYFGLHAGLMWLERTFNLAQRWPQWILSCWTWLAILGPLSWLFHQQFRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVPALHWA HHHHHHHCCC >Mature Secondary Structure MQTLLWWIYWPLSWLLIVASAWYLPNRWRNSVGWSILGFGGALSLYLAIDLDPWQRLLTS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCEEEHEEEECCHHHHHHHH TAGLILLLKAVVLLQIPRQELQRYSHVGLGLFMTIWPGMNPAPFRQRRQIQRDLGPTIIQ HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHH GWVGVMAGSCGLILSAYLLPWLGQAWASWAAILSILGIVHFGLAYWLNAGLWYWGWPVAA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFRQPLQSRSLRDFWSVRWNIAFVEMNKQLFLRRLGRYGPSTLVIGIFLLSGIFHELGLS HHHHHHHHCHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC YPAQAGWGQAMAYFGLHAGLMWLERTFNLAQRWPQWILSCWTWLAILGPLSWLFHQQFRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVPALHWA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA