Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899330
Identifier: 159899330
GI number: 159899330
Start: 3572613
End: 3573005
Strand: Direct
Name: 159899330
Synonym: Haur_2811
Alternate gene names: NA
Gene position: 3572613-3573005 (Clockwise)
Preceding gene: 159899329
Following gene: 159899332
Centisome position: 56.29
GC content: 46.06
Gene sequence:
>393_bases TTGGCAGCTTTGGCTCATGGCATAATTTTGCTGGCGAGTTCTCAAGTGCCCAAACAACTGAATTGGCGGCAAGATCTCGC CAAATTAACGCCGTTTAACCGCAAAATTATGTGGACGTATGGCGGCTTTATTGTGCTTTGCATCATCGTCTTTGGTTGTT TGTTGGCTTGGCTCAAGAGCGATATTTTGCAAGGGCAACCAGCCGCGTTAGGTCTGGTTGCCTTCAATGGACTCTTTTGG ACAACGCGAGTTATTGTTGATTTTAGCTATTTCAAACATAGCGATTGGCCATCAGGGCTGCTATTTGTGATTGGTCATTG CTGCCTTAGCACAACCTTTATTGCCATCGTGATCGTCGATTGGTCTGTGCTTGCTTGGCACATACTAACCTAG
Upstream 100 bases:
>100_bases TCAACAATTTCGCCAAGCGCTGATTGTACCTGCCCTACATTGGGCCTAAGCACTATTGCATAGTCAGCCGCTTGATTGGT ATTTTGGCTGGGGCATCAGT
Downstream 100 bases:
>100_bases TCAATGGGCTAGGCTAATTAAGCTATATCCCTTATTTAGTTGCCCACGGCAAATAAACCCGAAACTGATGGATTGAGGTT GTCGTGGGCAAGGCGGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAALAHGIILLASSQVPKQLNWRQDLAKLTPFNRKIMWTYGGFIVLCIIVFGCLLAWLKSDILQGQPAALGLVAFNGLFW TTRVIVDFSYFKHSDWPSGLLFVIGHCCLSTTFIAIVIVDWSVLAWHILT
Sequences:
>Translated_130_residues MAALAHGIILLASSQVPKQLNWRQDLAKLTPFNRKIMWTYGGFIVLCIIVFGCLLAWLKSDILQGQPAALGLVAFNGLFW TTRVIVDFSYFKHSDWPSGLLFVIGHCCLSTTFIAIVIVDWSVLAWHILT >Mature_129_residues AALAHGIILLASSQVPKQLNWRQDLAKLTPFNRKIMWTYGGFIVLCIIVFGCLLAWLKSDILQGQPAALGLVAFNGLFWT TRVIVDFSYFKHSDWPSGLLFVIGHCCLSTTFIAIVIVDWSVLAWHILT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14565; Mature: 14433
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALAHGIILLASSQVPKQLNWRQDLAKLTPFNRKIMWTYGGFIVLCIIVFGCLLAWLKS CCCHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DILQGQPAALGLVAFNGLFWTTRVIVDFSYFKHSDWPSGLLFVIGHCCLSTTFIAIVIVD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH WSVLAWHILT HHHHHHHCCC >Mature Secondary Structure AALAHGIILLASSQVPKQLNWRQDLAKLTPFNRKIMWTYGGFIVLCIIVFGCLLAWLKS CCHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DILQGQPAALGLVAFNGLFWTTRVIVDFSYFKHSDWPSGLLFVIGHCCLSTTFIAIVIVD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH WSVLAWHILT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA