Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899327

Identifier: 159899327

GI number: 159899327

Start: 3570208

End: 3570750

Strand: Direct

Name: 159899327

Synonym: Haur_2808

Alternate gene names: NA

Gene position: 3570208-3570750 (Clockwise)

Preceding gene: 159899325

Following gene: 159899328

Centisome position: 56.25

GC content: 46.59

Gene sequence:

>543_bases
ATGGAACATGTGATTCTAGGGTTGTTGATGCTCAGGCAACGCAGCATCTACGAGATCAAGAAAATTCTCGAAGAGACGAT
TTCGTTGTTTTATAGTGCCAGCTTTGGCAGCATCAACAGCGCGATTGAAAAATTGGTGGCAAAACAAGCAGTGACGGTGC
AGGAGCAGGTTGAGAGTGGGCGATTCAAAAAAATTTATAGCATCACGCCAAGCGGCCAAGCGCTGTTTGAGCAATGGCTG
GCGAGCGCAATTCCCCAAGAGAAGGTCAAAGATCCAGCCTTGACCCGTTTGTTTTTTATGGGCTTTCTCGCCCCAAGCGA
GCAAATTCGGCTCTTGCGTGAACATCTTGGGAGTGTGCAAATAGTACATGCCCAACTCAACAGCTTGTTGCGTGAGCGCG
AGCAAATCAATGTGGCAGCTGAACAACAAGCGCTCGCCGATTTTCAATGGCTAACCTTGGAATATGGTGTAGCCTACTAC
AGTTTCAATATTAATTGGTATCAACAACTGCTAAGCAAACTTGAGGAATCTGGCAATGAGTAA

Upstream 100 bases:

>100_bases
CGAGCACGATCATAGCAAATCAGCGCAAGCACTTCAAATTGCGAGGCTTGACAATCGCTTAATCTATATTACTATTAGAT
ATATAACGCAAGGATATATT

Downstream 100 bases:

>100_bases
TCAATTAAGCGCTAAAACGATTAATATACACGATTTTGATTTACACTACTATACCGTAGGCAACCCCGACAACCCAGCTT
TGATCTTAATTCATCCAGCG

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator; Transcriptional Repressor Of PadC; Transcriptional Repressor

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL
ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY
SFNINWYQQLLSKLEESGNE

Sequences:

>Translated_180_residues
MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL
ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY
SFNINWYQQLLSKLEESGNE
>Mature_180_residues
MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL
ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY
SFNINWYQQLLSKLEESGNE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20642; Mature: 20642

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RFKKIYSITPSGQALFEQWLASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQ
CCCEEEEECCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
IVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYYSFNINWYQQLLSKLEESGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RFKKIYSITPSGQALFEQWLASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQ
CCCEEEEECCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
IVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYYSFNINWYQQLLSKLEESGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA