Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is add [H]
Identifier: 159899316
GI number: 159899316
Start: 3556150
End: 3557190
Strand: Direct
Name: add [H]
Synonym: Haur_2797
Alternate gene names: 159899316
Gene position: 3556150-3557190 (Clockwise)
Preceding gene: 159899315
Following gene: 159899319
Centisome position: 56.03
GC content: 52.35
Gene sequence:
>1041_bases ATGCACTCGCCGCTTGCTGAATTTATTCGCCGCATGCCCAAATGTGAGCTTCATGTTCACTTAGAAGGCTCGATTACCCC TAAAACGCTTTTAGAGCTAGCGACGAAGAATGGCATTAGCTTGCCTGCTAGCGATTTGGCTGGGGTCGAGCGCATGTTTC AATATGAACATTTCCTCGGCTTTTTGGATGTGTATCGCACCTGTGCTCGCTGTTTGATCCATGGTGAGGATTTTGAGCGG GTTGCCTATGAATTGGCAATCGATTTGGCGCAACAACAGGTGCGTTATGCTGAAGTGATGCTCTCGCCTGCTCAGCACAT GCTCCGCAACATGGATTTCGATGAGATTCTTGGTGGTGTTGCGGCTGGGTTTGCCCGTGCTGAGCGCGAGATGGGCATTG TGTGTCGGCCTGCCTTTGATTTTGGTCGGCAGTTTAGCCTTGATCAAGCCTTACGAGCGGTCGAGTTGGCCCAAGCTGGC ATGCAATATGGGGTTGTCGCCTTTTCGATTGGCGGCGATGAGGCCAACTATCCCCCTGAGCCGTTTGTTGAGGTGTTTGC CTTGGCCAAGGCGGTTGGGCTGCACGTTATGGCTCATGCTGGCGAGGTCGCTGGGGCCAATAGCGTGCGCGGCGCAGTCG AAATGCTGGGCGTAGATCGAATTGGCCATGGTTTTCGGGTGCTTGAGGATGCCGAATTAACCCAATTTCTGGCTCGCCGT GGCGATATTACCTTCGATGTGTGCCCAACCAGCAATATTCGGACTGGTGTGGTTGCCTCGTTTGATCAACACCCTCTGCG CCAGATGCTCGATGCTGGATTGCCAATTACCCTCAACTCCGATGATCCAGTCTTGTTTGATACAACAGTAACTGGTGAGT TTTTGCTGGCCGCCGAACGCTATGATTTTACGATTGATGATATTTGTAAAGTCGCCCGCCAAAGCGCCAAAGCCGCCTTC TTACCAGCCGAACAACGCCAACAACTGCTGCTTGAGTTTGATCAACAACAAGCCCAATTGCGGCGCGAACTCGGCTTATA A
Upstream 100 bases:
>100_bases TGCTTGATGGAGCGCTTGATCGCTTGATCGATGCGCTAGTTACCTTCGACAACGCCGAACGGCTTAAGGCCTTGGGTATG GGAGCCTAGGAGTTTGTTGC
Downstream 100 bases:
>100_bases TCCGAAGAGCATAGAACAGAACAGAGGGTTCATTCTCTGCCCTTCCAGCAGGCGAGAGGAAACTATGCCATGATAGCTAT TAGAACTTCCAGCTATGGTC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MHSPLAEFIRRMPKCELHVHLEGSITPKTLLELATKNGISLPASDLAGVERMFQYEHFLGFLDVYRTCARCLIHGEDFER VAYELAIDLAQQQVRYAEVMLSPAQHMLRNMDFDEILGGVAAGFARAEREMGIVCRPAFDFGRQFSLDQALRAVELAQAG MQYGVVAFSIGGDEANYPPEPFVEVFALAKAVGLHVMAHAGEVAGANSVRGAVEMLGVDRIGHGFRVLEDAELTQFLARR GDITFDVCPTSNIRTGVVASFDQHPLRQMLDAGLPITLNSDDPVLFDTTVTGEFLLAAERYDFTIDDICKVARQSAKAAF LPAEQRQQLLLEFDQQQAQLRRELGL
Sequences:
>Translated_346_residues MHSPLAEFIRRMPKCELHVHLEGSITPKTLLELATKNGISLPASDLAGVERMFQYEHFLGFLDVYRTCARCLIHGEDFER VAYELAIDLAQQQVRYAEVMLSPAQHMLRNMDFDEILGGVAAGFARAEREMGIVCRPAFDFGRQFSLDQALRAVELAQAG MQYGVVAFSIGGDEANYPPEPFVEVFALAKAVGLHVMAHAGEVAGANSVRGAVEMLGVDRIGHGFRVLEDAELTQFLARR GDITFDVCPTSNIRTGVVASFDQHPLRQMLDAGLPITLNSDDPVLFDTTVTGEFLLAAERYDFTIDDICKVARQSAKAAF LPAEQRQQLLLEFDQQQAQLRRELGL >Mature_346_residues MHSPLAEFIRRMPKCELHVHLEGSITPKTLLELATKNGISLPASDLAGVERMFQYEHFLGFLDVYRTCARCLIHGEDFER VAYELAIDLAQQQVRYAEVMLSPAQHMLRNMDFDEILGGVAAGFARAEREMGIVCRPAFDFGRQFSLDQALRAVELAQAG MQYGVVAFSIGGDEANYPPEPFVEVFALAKAVGLHVMAHAGEVAGANSVRGAVEMLGVDRIGHGFRVLEDAELTQFLARR GDITFDVCPTSNIRTGVVASFDQHPLRQMLDAGLPITLNSDDPVLFDTTVTGEFLLAAERYDFTIDDICKVARQSAKAAF LPAEQRQQLLLEFDQQQAQLRRELGL
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=343, Percent_Identity=31.4868804664723, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI226693318, Length=337, Percent_Identity=22.5519287833828, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1787910, Length=323, Percent_Identity=30.6501547987616, Blast_Score=147, Evalue=7e-37, Organism=Caenorhabditis elegans, GI32565969, Length=342, Percent_Identity=29.5321637426901, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17538512, Length=342, Percent_Identity=29.5321637426901, Blast_Score=134, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6324188, Length=338, Percent_Identity=29.8816568047337, Blast_Score=158, Evalue=1e-39, Organism=Drosophila melanogaster, GI24645260, Length=344, Percent_Identity=27.0348837209302, Blast_Score=108, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 38333; Mature: 38333
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPLAEFIRRMPKCELHVHLEGSITPKTLLELATKNGISLPASDLAGVERMFQYEHFLG CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FLDVYRTCARCLIHGEDFERVAYELAIDLAQQQVRYAEVMLSPAQHMLRNMDFDEILGGV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAGFARAEREMGIVCRPAFDFGRQFSLDQALRAVELAQAGMQYGVVAFSIGGDEANYPPE HHHHHHHHHHCCEEEECCHHCCCCCCHHHHHHHHHHHHHCHHHCEEEEEECCCCCCCCCH PFVEVFALAKAVGLHVMAHAGEVAGANSVRGAVEMLGVDRIGHGFRVLEDAELTQFLARR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GDITFDVCPTSNIRTGVVASFDQHPLRQMLDAGLPITLNSDDPVLFDTTVTGEFLLAAER CCCEEEECCCCCCCCCHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEEEEECC YDFTIDDICKVARQSAKAAFLPAEQRQQLLLEFDQQQAQLRRELGL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSPLAEFIRRMPKCELHVHLEGSITPKTLLELATKNGISLPASDLAGVERMFQYEHFLG CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FLDVYRTCARCLIHGEDFERVAYELAIDLAQQQVRYAEVMLSPAQHMLRNMDFDEILGGV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAGFARAEREMGIVCRPAFDFGRQFSLDQALRAVELAQAGMQYGVVAFSIGGDEANYPPE HHHHHHHHHHCCEEEECCHHCCCCCCHHHHHHHHHHHHHCHHHCEEEEEECCCCCCCCCH PFVEVFALAKAVGLHVMAHAGEVAGANSVRGAVEMLGVDRIGHGFRVLEDAELTQFLARR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GDITFDVCPTSNIRTGVVASFDQHPLRQMLDAGLPITLNSDDPVLFDTTVTGEFLLAAER CCCEEEECCCCCCCCCHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEEEEECC YDFTIDDICKVARQSAKAAFLPAEQRQQLLLEFDQQQAQLRRELGL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA