Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yhaZ [H]

Identifier: 159899266

GI number: 159899266

Start: 3502627

End: 3503403

Strand: Direct

Name: yhaZ [H]

Synonym: Haur_2747

Alternate gene names: 159899266

Gene position: 3502627-3503403 (Clockwise)

Preceding gene: 159899258

Following gene: 159899267

Centisome position: 55.19

GC content: 51.61

Gene sequence:

>777_bases
ATGGCTGAATCACGCAAGGGCGCAACCAAACTAGCCAATATTCCGCCCGACATTTTACAGCAACTCAATACTGGTCAACT
TGCTACTGCTAATTTAATGGAAGGCTTGGCGATCGATTTTCAGCAATTAGTGCAACATTGTTTTGCTGAATTGCCTGCCA
CTGCTTTGGCAAGATATGATCCAACGACGGGAGTCGTCAAGCGCATGCAAACAATGGGCCAAATTCTCAATCAACAGCTA
GGCTTTGGGGCGTTCAATCGCGTAGCAACCCATCAAGCCGATACGGTGCGCGGTTGGGCCGCCTTTATGCTGGCCGATCA
GGCTGATTTGAGCATTGTCGAGCGATTAAAGTTGGTACAACCCTTGGCTGATGATGCTCATTTTGGCGTGCGCGAATGGG
CTTGGCTGGCATTGCGACCACAGCTTGCTGCCGATTTAGCCACGAGCCTGAGTGAATTGCAAACTTGGGTTGGTCATAGT
TCGGAGAATATTCGGCGCTTTGCAATTGAGTCGTTGCGCCCGCGCGGCGTTTGGTGCAGCCATATCAATCAATTAAAACA
AAACCCTAGCTTGGCGCTCGAGCTTTTAACCCCAGTGCGCTCCGATGCCAGCCGCTATGTCCAGCTTTCAGTTGCCAATT
GGCTCAACGATGCCAGCAAAGCCCAGCCAAGTTGGGTTGAGCAATTAACCACGCAATGGCTGGCTGAATCGCCAAGCGCT
GAAACCCGCTGGATCGTGAACCATGCCACTCGGAGTTTGCGCAAAGCCAAGGGCTAA

Upstream 100 bases:

>100_bases
TTTGAGCCTAACCAAACCACATAAATATGCTTATTGCCGATTGATGATTGCTTTAGTATCATACAAACGAACATTTGAGC
GATTATTCAAAGGATTCTCA

Downstream 100 bases:

>100_bases
AATTGCCAAACAGCAAACGAATCGGTAGATAGACCGATCTCACATTGGGCTATTTCGGTTAAGCTATGCGGTAGCTCGGA
TGTTTGTATGACATGGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQL
GFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHS
SENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA
ETRWIVNHATRSLRKAKG

Sequences:

>Translated_258_residues
MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQL
GFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHS
SENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA
ETRWIVNHATRSLRKAKG
>Mature_257_residues
AESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQLG
FGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSS
ENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSAE
TRWIVNHATRSLRKAKG

Specific function: Unknown

COG id: COG4335

COG function: function code L; DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HEAT repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR000357
- InterPro:   IPR021133 [H]

Pfam domain/function: PF02985 HEAT [H]

EC number: NA

Molecular weight: Translated: 28685; Mature: 28554

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYD
CCCCCCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
PTTGVVKRMQTMGQILNQQLGFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQ
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
PLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSSENIRRFAIESLRPRGVWCS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
HINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
ETRWIVNHATRSLRKAKG
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYD
CCCCCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
PTTGVVKRMQTMGQILNQQLGFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQ
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
PLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSSENIRRFAIESLRPRGVWCS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
HINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
ETRWIVNHATRSLRKAKG
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]