| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898214
Identifier: 159898214
GI number: 159898214
Start: 1963953
End: 1965068
Strand: Reverse
Name: 159898214
Synonym: Haur_1690
Alternate gene names: NA
Gene position: 1965068-1963953 (Counterclockwise)
Preceding gene: 159898215
Following gene: 159898211
Centisome position: 30.96
GC content: 53.14
Gene sequence:
>1116_bases ATGGGGATTCACGATTCGTTTGACGATATTGGCAACCAAGCAAGTTCACGACGCTCATTTTTGCGCAATAGTGGGTTGGC AGCCTTAGCAACTGCTGGGGCATTGAGTGCCTTTGATCAAGCGGCAGCCAATACTAAGCCTGCCCAAAGCGAAAGCATTG CCGCCACCACAGGCGAGATTCCAGCCAGTGCCCAATTTGCGCGGCGAGCATTTCGCTCGTTGACCTTGCTGGCAATGAGT GCCGTCACCAGCGACACGCGTTTTGCCCAAAAAGTTTATGGCTTGGCCTTAGCCGATTTAGAAATAAACCTCGCTGGTTT GCAAAACGCCAGCGATAACGTTACCAGCCTGAGCTACACCCCCAACCCCGACGACGACTACGAACCACGTCCTTGGTGGT GGCCACGTCCTTGGTGGCGGCTCAAAGAACAATTATTCACGCCAATTGAGCGGATTCCTGCTGGCGGTTTGGTAGTACTT GACCTCCATCGCAGCCTTGATGCCTTCAACATGGCCTTTCAATATGGCGACCAAACCTTGCAAGCCGAAAATTTGCGTTT AGCTCGCGGCGAATTACGCAGCCACCTGGCAACCTTGAAAGGCTCAAGTAGCTTTGCCGCATGGGAGCCAGGCGATGATA TTTGCCCACCTTGGTGGCCATGGCCGTTCCCTCCAATCCGCAAGCCAAGTATTCCTACATCGCAGCCATTACTTGAGCTT GGCACATTAACCAAAGGTTTAATCAACTATGGTTTAGGCCAATCCATGCACAATGCGGCACTTGGTCGCGCCCGCAGCAA AGCAATTATTGTGCAAATTCAGGGCAGTGCTCGCAAAATGGCTGGTTACGGTGGAAGTTTGGTTGGCTGGGAAGATGGCG ATGATATTTGCCCACGCTGGCCGTTCCCATGGCCAGGCCCATGGTCACTTGGCCAAGTGCTTGATCAATACAGCGCCGAG CCAGAGCCACTGCCATGGCGGCCTATTGCTAGCGAAGTCTTGCGGGCCGGCACCATTTTTGCCATCGCCAGCAATCTCGG TGATCGTGGCATCGCCCAAGGCTTACGCGATGCAGCAATTGTGCAAATTCAAGATCAAGTTGCCAAATTAGGTTAA
Upstream 100 bases:
>100_bases GCTGTTCAATCGCAGCTAAATCAATTGCTCGAAGGAAAGCCCAGCAATCCCCATTGCGTCTTAATGGCATCGAAGAGTTA TTTTCGTTCGGAGGATTTCA
Downstream 100 bases:
>100_bases TTATTGCCAATTGCAGCCGAGCTACGCAACCCGTTTGCTCGGCTGCAAACGATTAAGTGGCCAAATCTCAAGTTCGTCCA GTTCGCGTAACAACCGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMS AVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVL DLHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAE PEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG
Sequences:
>Translated_371_residues MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMS AVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVL DLHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAE PEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG >Mature_370_residues GIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMSA VTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLD LHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLELG TLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAEP EPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40414; Mature: 40283
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEI CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC PASAQFARRAFRSLTLLAMSAVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEC PNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLDLHRSLDAFNMAFQYGDQTL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCHH QAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRW HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCC PFPWPGPWSLGQVLDQYSAEPEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAI CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VQIQDQVAKLG HHHHHHHHHCC >Mature Secondary Structure GIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEI CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC PASAQFARRAFRSLTLLAMSAVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEC PNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLDLHRSLDAFNMAFQYGDQTL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCHH QAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRW HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCC PFPWPGPWSLGQVLDQYSAEPEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAI CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VQIQDQVAKLG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA