Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898214

Identifier: 159898214

GI number: 159898214

Start: 1963953

End: 1965068

Strand: Reverse

Name: 159898214

Synonym: Haur_1690

Alternate gene names: NA

Gene position: 1965068-1963953 (Counterclockwise)

Preceding gene: 159898215

Following gene: 159898211

Centisome position: 30.96

GC content: 53.14

Gene sequence:

>1116_bases
ATGGGGATTCACGATTCGTTTGACGATATTGGCAACCAAGCAAGTTCACGACGCTCATTTTTGCGCAATAGTGGGTTGGC
AGCCTTAGCAACTGCTGGGGCATTGAGTGCCTTTGATCAAGCGGCAGCCAATACTAAGCCTGCCCAAAGCGAAAGCATTG
CCGCCACCACAGGCGAGATTCCAGCCAGTGCCCAATTTGCGCGGCGAGCATTTCGCTCGTTGACCTTGCTGGCAATGAGT
GCCGTCACCAGCGACACGCGTTTTGCCCAAAAAGTTTATGGCTTGGCCTTAGCCGATTTAGAAATAAACCTCGCTGGTTT
GCAAAACGCCAGCGATAACGTTACCAGCCTGAGCTACACCCCCAACCCCGACGACGACTACGAACCACGTCCTTGGTGGT
GGCCACGTCCTTGGTGGCGGCTCAAAGAACAATTATTCACGCCAATTGAGCGGATTCCTGCTGGCGGTTTGGTAGTACTT
GACCTCCATCGCAGCCTTGATGCCTTCAACATGGCCTTTCAATATGGCGACCAAACCTTGCAAGCCGAAAATTTGCGTTT
AGCTCGCGGCGAATTACGCAGCCACCTGGCAACCTTGAAAGGCTCAAGTAGCTTTGCCGCATGGGAGCCAGGCGATGATA
TTTGCCCACCTTGGTGGCCATGGCCGTTCCCTCCAATCCGCAAGCCAAGTATTCCTACATCGCAGCCATTACTTGAGCTT
GGCACATTAACCAAAGGTTTAATCAACTATGGTTTAGGCCAATCCATGCACAATGCGGCACTTGGTCGCGCCCGCAGCAA
AGCAATTATTGTGCAAATTCAGGGCAGTGCTCGCAAAATGGCTGGTTACGGTGGAAGTTTGGTTGGCTGGGAAGATGGCG
ATGATATTTGCCCACGCTGGCCGTTCCCATGGCCAGGCCCATGGTCACTTGGCCAAGTGCTTGATCAATACAGCGCCGAG
CCAGAGCCACTGCCATGGCGGCCTATTGCTAGCGAAGTCTTGCGGGCCGGCACCATTTTTGCCATCGCCAGCAATCTCGG
TGATCGTGGCATCGCCCAAGGCTTACGCGATGCAGCAATTGTGCAAATTCAAGATCAAGTTGCCAAATTAGGTTAA

Upstream 100 bases:

>100_bases
GCTGTTCAATCGCAGCTAAATCAATTGCTCGAAGGAAAGCCCAGCAATCCCCATTGCGTCTTAATGGCATCGAAGAGTTA
TTTTCGTTCGGAGGATTTCA

Downstream 100 bases:

>100_bases
TTATTGCCAATTGCAGCCGAGCTACGCAACCCGTTTGCTCGGCTGCAAACGATTAAGTGGCCAAATCTCAAGTTCGTCCA
GTTCGCGTAACAACCGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMS
AVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVL
DLHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL
GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAE
PEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG

Sequences:

>Translated_371_residues
MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMS
AVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVL
DLHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL
GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAE
PEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG
>Mature_370_residues
GIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEIPASAQFARRAFRSLTLLAMSA
VTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYTPNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLD
LHRSLDAFNMAFQYGDQTLQAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLELG
TLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRWPFPWPGPWSLGQVLDQYSAEP
EPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAIVQIQDQVAKLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40414; Mature: 40283

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEI
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
PASAQFARRAFRSLTLLAMSAVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEC
PNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLDLHRSLDAFNMAFQYGDQTL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCHH
QAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRW
HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCC
PFPWPGPWSLGQVLDQYSAEPEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAI
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQIQDQVAKLG
HHHHHHHHHCC
>Mature Secondary Structure 
GIHDSFDDIGNQASSRRSFLRNSGLAALATAGALSAFDQAAANTKPAQSESIAATTGEI
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
PASAQFARRAFRSLTLLAMSAVTSDTRFAQKVYGLALADLEINLAGLQNASDNVTSLSYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEC
PNPDDDYEPRPWWWPRPWWRLKEQLFTPIERIPAGGLVVLDLHRSLDAFNMAFQYGDQTL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCHH
QAENLRLARGELRSHLATLKGSSSFAAWEPGDDICPPWWPWPFPPIRKPSIPTSQPLLEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GTLTKGLINYGLGQSMHNAALGRARSKAIIVQIQGSARKMAGYGGSLVGWEDGDDICPRW
HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCC
PFPWPGPWSLGQVLDQYSAEPEPLPWRPIASEVLRAGTIFAIASNLGDRGIAQGLRDAAI
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQIQDQVAKLG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA