| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898215
Identifier: 159898215
GI number: 159898215
Start: 1965150
End: 1965689
Strand: Reverse
Name: 159898215
Synonym: Haur_1691
Alternate gene names: NA
Gene position: 1965689-1965150 (Counterclockwise)
Preceding gene: 159898223
Following gene: 159898214
Centisome position: 30.97
GC content: 50.93
Gene sequence:
>540_bases ATGACAGAGCAACAACCAATGGCCGCCGCGCCAATTAAATATCGCGAAGATGGCGAGGTCGATTGGGCCAATATGTGGGA AACATTCTGCGATTTAGCGCTTGAGGGTGGGCCAGCCCATCGCGGTGCCGAGGCAAACATCCCAATCCAAATCAATGCCA ATCCCCAGCATCCCAACTATATGCAGGTCTATGCTGAGTTATGTCGCGGTATCTACGAAGTCAGCGGCTTGAGCGCCCAT ATCGGCGAAAAGCCCGAGTGGTTGGCGATCGAATGTCCGATTGTTGGTCAAGCTCAGTGGCTAGCTGGCGCAATCAATCA AGAACATGTTGCGGCGCAGGCTACTGGTCAACAGCTGCTTGTGCCAATTCATCAAGATTTCAGCCTCAAAAGCGAAATCA AAAGTGTGATTACGGTCGTCGCCAAAACCACTCACTACTGGACTGAGCACCTGCCACAGTCGGTCAAACAAAGTTTTGCC ATTCAAGCCCAATTGAGCAAAGCCGGCAAAAAAATCAAACGGCTGTTCAATCGCAGCTAA
Upstream 100 bases:
>100_bases TAGCACACAGCGAACAGCCGCACCATTATAAACGATGCTGTGGCGAAGAATTAAGTTAAAATAGCGAGTCACAGATTCAT ACAAGCAAGGAATGTGAGTG
Downstream 100 bases:
>100_bases ATCAATTGCTCGAAGGAAAGCCCAGCAATCCCCATTGCGTCTTAATGGCATCGAAGAGTTATTTTCGTTCGGAGGATTTC AATGGGGATTCACGATTCGT
Product: cobalamin (vitamin B12) biosynthesis protein CbiX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTEQQPMAAAPIKYREDGEVDWANMWETFCDLALEGGPAHRGAEANIPIQINANPQHPNYMQVYAELCRGIYEVSGLSAH IGEKPEWLAIECPIVGQAQWLAGAINQEHVAAQATGQQLLVPIHQDFSLKSEIKSVITVVAKTTHYWTEHLPQSVKQSFA IQAQLSKAGKKIKRLFNRS
Sequences:
>Translated_179_residues MTEQQPMAAAPIKYREDGEVDWANMWETFCDLALEGGPAHRGAEANIPIQINANPQHPNYMQVYAELCRGIYEVSGLSAH IGEKPEWLAIECPIVGQAQWLAGAINQEHVAAQATGQQLLVPIHQDFSLKSEIKSVITVVAKTTHYWTEHLPQSVKQSFA IQAQLSKAGKKIKRLFNRS >Mature_178_residues TEQQPMAAAPIKYREDGEVDWANMWETFCDLALEGGPAHRGAEANIPIQINANPQHPNYMQVYAELCRGIYEVSGLSAHI GEKPEWLAIECPIVGQAQWLAGAINQEHVAAQATGQQLLVPIHQDFSLKSEIKSVITVVAKTTHYWTEHLPQSVKQSFAI QAQLSKAGKKIKRLFNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19915; Mature: 19784
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQQPMAAAPIKYREDGEVDWANMWETFCDLALEGGPAHRGAEANIPIQINANPQHPNY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHH MQVYAELCRGIYEVSGLSAHIGEKPEWLAIECPIVGQAQWLAGAINQEHVAAQATGQQLL HHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHCCCCEEE VPIHQDFSLKSEIKSVITVVAKTTHYWTEHLPQSVKQSFAIQAQLSKAGKKIKRLFNRS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEQQPMAAAPIKYREDGEVDWANMWETFCDLALEGGPAHRGAEANIPIQINANPQHPNY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHH MQVYAELCRGIYEVSGLSAHIGEKPEWLAIECPIVGQAQWLAGAINQEHVAAQATGQQLL HHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHCCCCEEE VPIHQDFSLKSEIKSVITVVAKTTHYWTEHLPQSVKQSFAIQAQLSKAGKKIKRLFNRS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA