| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yghZ [H]
Identifier: 159898211
GI number: 159898211
Start: 1961683
End: 1962615
Strand: Reverse
Name: yghZ [H]
Synonym: Haur_1687
Alternate gene names: 159898211
Gene position: 1962615-1961683 (Counterclockwise)
Preceding gene: 159898214
Following gene: 159898206
Centisome position: 30.92
GC content: 49.84
Gene sequence:
>933_bases GTGGAATATCGACGGTTAGGCAAAGCAGGCATGCGGGTAAGTGCGGTATCGCTCGGCGCATGGTTGACCTACGGCGGCAG TGTCGAAGGCGATCAAGCCGCCCAATGTTTGCGGGCAGCAATCGACAATGGCATCAATTTTATCGATGTTGCCGATGCAT ATGCCTACGGCGAAGCTGAAAAAGTGGTTGGCGGCGTAATCCGCGATTACAAACGCTCGGATTTGGTGCTTTCTTCCAAG CTCTATTGGCCGATGAGCAACAATGTGAACGATCAAGGGCTAAGTCGCAAACATATTATGGAATCAATTGATAAAAGTTT GCGCCATTTTGGTACCGATTATTTGGATATTTATTTCTGCCACCGTTTCGATGCCAACACGCCACTCGAAGAAACTGTCC GCGCAATGAGCGATTTGGTGCAGGCTGGCAAAATTCTCTATTGGGGAACTAGCGTCTGGGAAGCTGAGCAAATTGAGCAA GCGGTCAGCATCGCCAAACAATATAATGGCTATTTGCCGCAAGTTGAACAACCACGCTACAACATGCTTGATCGCCACAT CGAGCCAGCGATCATCCCAACCTGTGAGCAACATGGCCTTGGCTTGACGGTTTGGAGTCCTTTGGCCCAAGGCTTGTTAA CTGGCAAATATAATGCGGGCTTGCCAGAGGGCAGTCGCGGAGCCACCACCAAATGGCTTGATCGTGAACTCAACGAAAAT AACTTGAATAAGGTACGCCAATTAACCACGATTGCTGGCGATCTTGGCCTAACCACCAGCCAATTGGCCTTGGCTTGGGT GTTGCGTTTGCCGCAAATTAGCTCGGTCATTACTGGCGCAACCAAACCTGAGCATGTGCTCGATAACATCAAAGCTGGCG AAGTTCAATTGAGCGCTGATGTCCAAGCCCAAATTGAGGCAATTCTGGCCTAA
Upstream 100 bases:
>100_bases TTTTCCACTGCATAACCAAGGCAAGAGCTATGCCAAGAACCATTCCAATTCGTGGTATGATCAAATTGTAATTTCAGCAT ATCTTCCTGAGGAGGCTTCT
Downstream 100 bases:
>100_bases AATAGCACAGCCCCACCAACGATCTCGTTGGTGGGGCTGCTTCAAAAGCTTAATTATTTCATAGTCCATTCGCCGCTGCC ACCAGTAACCGATGCTGCCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MEYRRLGKAGMRVSAVSLGAWLTYGGSVEGDQAAQCLRAAIDNGINFIDVADAYAYGEAEKVVGGVIRDYKRSDLVLSSK LYWPMSNNVNDQGLSRKHIMESIDKSLRHFGTDYLDIYFCHRFDANTPLEETVRAMSDLVQAGKILYWGTSVWEAEQIEQ AVSIAKQYNGYLPQVEQPRYNMLDRHIEPAIIPTCEQHGLGLTVWSPLAQGLLTGKYNAGLPEGSRGATTKWLDRELNEN NLNKVRQLTTIAGDLGLTTSQLALAWVLRLPQISSVITGATKPEHVLDNIKAGEVQLSADVQAQIEAILA
Sequences:
>Translated_310_residues MEYRRLGKAGMRVSAVSLGAWLTYGGSVEGDQAAQCLRAAIDNGINFIDVADAYAYGEAEKVVGGVIRDYKRSDLVLSSK LYWPMSNNVNDQGLSRKHIMESIDKSLRHFGTDYLDIYFCHRFDANTPLEETVRAMSDLVQAGKILYWGTSVWEAEQIEQ AVSIAKQYNGYLPQVEQPRYNMLDRHIEPAIIPTCEQHGLGLTVWSPLAQGLLTGKYNAGLPEGSRGATTKWLDRELNEN NLNKVRQLTTIAGDLGLTTSQLALAWVLRLPQISSVITGATKPEHVLDNIKAGEVQLSADVQAQIEAILA >Mature_310_residues MEYRRLGKAGMRVSAVSLGAWLTYGGSVEGDQAAQCLRAAIDNGINFIDVADAYAYGEAEKVVGGVIRDYKRSDLVLSSK LYWPMSNNVNDQGLSRKHIMESIDKSLRHFGTDYLDIYFCHRFDANTPLEETVRAMSDLVQAGKILYWGTSVWEAEQIEQ AVSIAKQYNGYLPQVEQPRYNMLDRHIEPAIIPTCEQHGLGLTVWSPLAQGLLTGKYNAGLPEGSRGATTKWLDRELNEN NLNKVRQLTTIAGDLGLTTSQLALAWVLRLPQISSVITGATKPEHVLDNIKAGEVQLSADVQAQIEAILA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=321, Percent_Identity=41.4330218068536, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI27436964, Length=320, Percent_Identity=40, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI4504825, Length=319, Percent_Identity=41.3793103448276, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI27436962, Length=320, Percent_Identity=40, Blast_Score=247, Evalue=8e-66, Organism=Homo sapiens, GI27436966, Length=320, Percent_Identity=39.6875, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI27436971, Length=320, Percent_Identity=37.1875, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI223718702, Length=301, Percent_Identity=27.2425249169435, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI41152114, Length=299, Percent_Identity=27.0903010033445, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI41327764, Length=273, Percent_Identity=25.2747252747253, Blast_Score=82, Evalue=4e-16, Organism=Escherichia coli, GI1789375, Length=322, Percent_Identity=36.6459627329193, Blast_Score=201, Evalue=7e-53, Organism=Escherichia coli, GI87081735, Length=317, Percent_Identity=36.5930599369085, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788070, Length=316, Percent_Identity=32.5949367088608, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1789199, Length=341, Percent_Identity=32.8445747800587, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788081, Length=288, Percent_Identity=30.2083333333333, Blast_Score=96, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325169, Length=291, Percent_Identity=29.2096219931272, Blast_Score=141, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323998, Length=317, Percent_Identity=28.391167192429, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=27.3333333333333, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319951, Length=320, Percent_Identity=26.25, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=225, Percent_Identity=25.7777777777778, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6325384, Length=186, Percent_Identity=30.6451612903226, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI24640980, Length=334, Percent_Identity=32.3353293413174, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI45549126, Length=334, Percent_Identity=32.3353293413174, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24646155, Length=317, Percent_Identity=28.391167192429, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646159, Length=250, Percent_Identity=28.8, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 34240; Mature: 34240
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRRLGKAGMRVSAVSLGAWLTYGGSVEGDQAAQCLRAAIDNGINFIDVADAYAYGEAE CCHHHHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHH KVVGGVIRDYKRSDLVLSSKLYWPMSNNVNDQGLSRKHIMESIDKSLRHFGTDYLDIYFC HHHHHHHHHHHHCCEEEECEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE HRFDANTPLEETVRAMSDLVQAGKILYWGTSVWEAEQIEQAVSIAKQYNGYLPQVEQPRY EECCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH NMLDRHIEPAIIPTCEQHGLGLTVWSPLAQGLLTGKYNAGLPEGSRGATTKWLDRELNEN HHHHHCCCCCCCCCHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC NLNKVRQLTTIAGDLGLTTSQLALAWVLRLPQISSVITGATKPEHVLDNIKAGEVQLSAD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCEEECCC VQAQIEAILA HHHHHHHHCC >Mature Secondary Structure MEYRRLGKAGMRVSAVSLGAWLTYGGSVEGDQAAQCLRAAIDNGINFIDVADAYAYGEAE CCHHHHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHH KVVGGVIRDYKRSDLVLSSKLYWPMSNNVNDQGLSRKHIMESIDKSLRHFGTDYLDIYFC HHHHHHHHHHHHCCEEEECEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE HRFDANTPLEETVRAMSDLVQAGKILYWGTSVWEAEQIEQAVSIAKQYNGYLPQVEQPRY EECCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH NMLDRHIEPAIIPTCEQHGLGLTVWSPLAQGLLTGKYNAGLPEGSRGATTKWLDRELNEN HHHHHCCCCCCCCCHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC NLNKVRQLTTIAGDLGLTTSQLALAWVLRLPQISSVITGATKPEHVLDNIKAGEVQLSAD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCEEECCC VQAQIEAILA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]