Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898178

Identifier: 159898178

GI number: 159898178

Start: 1921427

End: 1922455

Strand: Reverse

Name: 159898178

Synonym: Haur_1654

Alternate gene names: NA

Gene position: 1922455-1921427 (Counterclockwise)

Preceding gene: 159898179

Following gene: 159898177

Centisome position: 30.29

GC content: 50.73

Gene sequence:

>1029_bases
ATGAGTCGTCGCAAAAAACGCCCAACCTCTGCTCAACCCGTAGCCAAAGCCAGCCAGATAGCTAGCACTAAAGCGACCAA
AGCGCAACATCGCCGCTCGTTATTGGCAGTTGGCAGCGTCCTTGCGGTGCTCAGCGTTTTAGGTTTAGGTTTGTGGTGGG
TAAATCGTAGTTCAGCGACTGCCAGCAATTTTCCAGTTGGCGAAGTAACCTCGTGCAAGCAAATCCCGCCCTTTGCCCAA
GCTCAAGGATTCGGGGTCAATGCGGTTTTAGATACTCAAGCGCGGCGCGTGCGTGGCATGGTAATGTACGATCTGACCAG
CGATGGTCAAGAGGCCAGCCAACCAGCACCCTATCAACACCCTTCTTGGTCAAAAGCAGGCTACTTGAGTTCACCAATTT
TGGATCGCGATGGGGCGATTTACGTTGGCGCAGTGCCGTGGGTCAGCATTTTGTATAATCCCCCAGCAGCAGCCAACAAA
GTCTATCGGATCGATCCACGCACTGCCGAATTGAGCGAATTGCTCGATTTGCCAACAGCTGCACCCGCCAACAATACCAA
TCCCTATGGCATTTTGGCGCTCAACTACGATTGCAACACCCATAGTTTGTATGTTTCATCGGTGCTTGGCTCGACCAAAG
ATCAACAATTTGGGCGGATTTTTCGCGTCGATTTAGCCACGAATAAAGCCAGTATCGTAATTGATGGCGTTGATAGCTTT
GGCATTGGAGTGTATAACGGTAACACTGGCAAGCGCTTGTATTATGCATTGGCGCGGCAGCCGCAAATCTACTCAATTGC
CTTAGATAACCAAGGCAACCCAACTGGCCAGCCGCGCCAAGAGATCGATTTTAGCGGTCAAGGCTATCATGGTGATGAGC
GTGGACGACGGATTAGCTTTGGCGATGCCACCATGCAAGTGCGCATCGTTCAATTCGATTACACCCTAACTGCGGTTACC
AACCCAAATGAAACAACCTTGAGCTACCGTTACAACCCACAAACTGATAGCTGGCAAGCTGAACCATAA

Upstream 100 bases:

>100_bases
ATATTGCTGGGCCGAATCGGTGTTGCGACGTGGCGTGTACATACCAGAGGAATATCCATGTTGGTCGGGGCCGCTCTTTC
AGCCAGTACGAGGCAAATAA

Downstream 100 bases:

>100_bases
CCAAGGAGCCTATACGACCGTAGTTCGCAGGTCGCGATTGACAGACCCAAAATCCCATAAACGAATCCGCCTAAAGTACC
GTTTAAAGTCATGCAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQ
AQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANK
VYRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF
GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVT
NPNETTLSYRYNPQTDSWQAEP

Sequences:

>Translated_342_residues
MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQ
AQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANK
VYRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF
GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVT
NPNETTLSYRYNPQTDSWQAEP
>Mature_341_residues
SRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQA
QGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKV
YRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSFG
IGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVTN
PNETTLSYRYNPQTDSWQAEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37326; Mature: 37195

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSAT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
ASNFPVGEVTSCKQIPPFAQAQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQH
CCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCC
PSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKVYRIDPRTAELSELLDLPTA
CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHCCCEEEECCCHHHHHHHHCCCCC
APANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF
CCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCC
GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISF
EEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHCCCEEEE
GDATMQVRIVQFDYTLTAVTNPNETTLSYRYNPQTDSWQAEP
CCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSAT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
ASNFPVGEVTSCKQIPPFAQAQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQH
CCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCC
PSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKVYRIDPRTAELSELLDLPTA
CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHCCCEEEECCCHHHHHHHHCCCCC
APANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF
CCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCC
GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISF
EEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHCCCEEEE
GDATMQVRIVQFDYTLTAVTNPNETTLSYRYNPQTDSWQAEP
CCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA