| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898171
Identifier: 159898171
GI number: 159898171
Start: 1904770
End: 1905111
Strand: Reverse
Name: 159898171
Synonym: Haur_1647
Alternate gene names: NA
Gene position: 1905111-1904770 (Counterclockwise)
Preceding gene: 159898172
Following gene: 159898167
Centisome position: 30.02
GC content: 47.37
Gene sequence:
>342_bases ATGGTCGTTTTGATCACGGAGAGTAATGAGCTTCGCCAACGGTTTATCGACCGTTTTGAAGTTTTGGCCATGCCATTAAT GGTGACAACGCCACGCATGATCAATGCATGCTTTCAACAATTTGTTCCCGAGCGGATTTTTGTCGATGCAAGTATCTGCA CCCCTGGCTTAATTCGTTGGCTTGATCAATGCGACGATGCAGAAATTATTTTGATCGCCAATTCGCGTGGCTCGATTCGC CATGCACCACGTGGGGCGATTATGTATATTCATCCTTCCTTAGAACCAGAAGATATTGTGCCGCTCTTGCCACTACGCCA AGATGCCAATAGCGCCGCCTAA
Upstream 100 bases:
>100_bases GGAAGGGCATCGTTGACGATGTTTTGCGACGTAGAACTCTTTGGCTATGTGGCAAACATTTTTACCTCACCCAGCCATGC TGAGGAACTAGGAGCACCAG
Downstream 100 bases:
>100_bases ACGCTTGCGAAGCCTGTTGATTTGAGAATATCAACAGGCTTCGATCATGTTCGCCCCAATTTTTCCCTATTCCAAACCCC AATCAACGCCGCTGTTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MVVLITESNELRQRFIDRFEVLAMPLMVTTPRMINACFQQFVPERIFVDASICTPGLIRWLDQCDDAEIILIANSRGSIR HAPRGAIMYIHPSLEPEDIVPLLPLRQDANSAA
Sequences:
>Translated_113_residues MVVLITESNELRQRFIDRFEVLAMPLMVTTPRMINACFQQFVPERIFVDASICTPGLIRWLDQCDDAEIILIANSRGSIR HAPRGAIMYIHPSLEPEDIVPLLPLRQDANSAA >Mature_113_residues MVVLITESNELRQRFIDRFEVLAMPLMVTTPRMINACFQQFVPERIFVDASICTPGLIRWLDQCDDAEIILIANSRGSIR HAPRGAIMYIHPSLEPEDIVPLLPLRQDANSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12804; Mature: 12804
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLITESNELRQRFIDRFEVLAMPLMVTTPRMINACFQQFVPERIFVDASICTPGLIRW CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHH LDQCDDAEIILIANSRGSIRHAPRGAIMYIHPSLEPEDIVPLLPLRQDANSAA HHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVVLITESNELRQRFIDRFEVLAMPLMVTTPRMINACFQQFVPERIFVDASICTPGLIRW CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHH LDQCDDAEIILIANSRGSIRHAPRGAIMYIHPSLEPEDIVPLLPLRQDANSAA HHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA